Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0408 ATGGCGGAACTGAGGAACAGGCAAGTGGTTCTGAACAACTATGTTGTTGGTTTTCCCAAAGAATCAGACATGAGCATTGTTGAAGGAACCATAACATTGAAGCTTCCAGAAGGTTCCTCTGATCTTCTCCTCAAAAATCTCTACCTCTCATGCGATCCCTACATGCGATTCCTCATGACCAAGGAGGACAACCCTTTGGGAATTGGCGCCTACAAGCTTTACTCTGCATTGACAGGAAATGGTGTGTCTAAAGTGGTGGAATCTGGAGATCCAGATTATAAGAAAGGTGATTTAGTTTGTGCATGGACTAGATGGGAAGAGTATAGTTTGATCCCTTCATCTCAAATACGGTTCAAAATTGAGCACACTGATCTCCCACTCTCCTATTATAGTGGAGTTCTTGGCATGCCTGGATTGTCTGCTTATGCTGGCTTCTTTGAGGTAGGTTCTCCCAAAAAAGGAGATAATGTTTTTGTTTCAGCTGCCTCTGGTGCTGTTGGTCAACTTGTTGGCCAATTCGCCAAGTTGAAGGGTTGTATGTTGTTGGAAGTGCTGGAAGCAAAGATAAGGTACTTTCCTGAAGGCATTGATATTTATTTTGAAAATGTTGGGGGCAAGACACTTGATGCAGTACTCCCAAATATGAGACTCCATGGTCGAATACCTATTTGTGGAATGATCTCACAGTACAATCTTACTCAACCTGAAGGTGTAACAAACTTGGCACATCTCATATTTAAGAGGGTTAAAATGGAAGGTTTTCTTGTAAGTGAATTCTTCCATCTATTTCCCAAATTCTTGGACTTTGTCATGCCTCTGATTAGAGAAGGGAAGGTTGTGTATGTGGAAGACATTGTTGAGGGTCTTGAGAATGGCCCTGCAGCGTTGGTTGGTCTCTATAGTGGTCGCAATGTCGGAAAACAAGTGGTGGTTGTTGCTCGTGAGTAA 948 0.4272 MAELRNRQVVLNNYVVGFPKESDMSIVEGTITLKLPEGSSDLLLKNLYLSCDPYMRFLMTKEDNPLGIGAYKLYSALTGNGVSKVVESGDPDYKKGDLVCAWTRWEEYSLIPSSQIRFKIEHTDLPLSYYSGVLGMPGLSAYAGFFEVGSPKKGDNVFVSAASGAVGQLVGQFAKLKGCMLLEVLEAKIRYFPEGIDIYFENVGGKTLDAVLPNMRLHGRIPICGMISQYNLTQPEGVTNLAHLIFKRVKMEGFLVSEFFHLFPKFLDFVMPLIREGKVVYVEDIVEGLENGPAALVGLYSGRNVGKQVVVVARE* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0408 315 Gene3D - 278 315 - -
Pvu10g0408 315 Pfam N-terminal domain of oxidoreductase 7 115 IPR041694 -
Pvu10g0408 315 PANTHER PROSTAGLANDIN REDUCTASE 187 315 IPR045010 GO:0016628
Pvu10g0408 315 PANTHER PROSTAGLANDIN REDUCTASE 1 182 IPR045010 GO:0016628
Pvu10g0408 315 Gene3D - 182 277 - -
Pvu10g0408 315 Gene3D - 3 162 - -
Pvu10g0408 315 PANTHER NADP-DEPENDENT ALKENAL DOUBLE BOND REDUCTASE 1 182 - -
Pvu10g0408 315 PANTHER NADP-DEPENDENT ALKENAL DOUBLE BOND REDUCTASE 187 315 - -
Pvu10g0408 315 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 132 274 IPR036291 -
Pvu10g0408 315 Pfam Zinc-binding dehydrogenase 191 269 IPR013149 -
Pvu10g0408 315 SUPERFAMILY GroES-like 4 170 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0408 Pvu-Chr10 5747134 5751690 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0408 K19825 - gmx:100812880 484.567