Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0407 ATGGCGGAACTGAGGAACAAGCAAGTGATTCTGAACAACTATGTTGTTGGTTTTCCCAAAGAATCAGACATGAGCATTGTTGAAGGAACCATAACTTTGAAGGTTCCAGAAGGTTCCTCTGATCTGCTCCTCAAAAATCTCTACCTCTCATGTGATCCCTACATGCGATTCTTCATGACCAAGGAGGACAACCCTTTGGGAATTGGCACCTACAAGCTTCACTCTGCATTGAGAGGAGATGGTGTGTCTCAAGTGGTGGAATCTGGACATCCAGATTATAAGAAAGGTGATTTAGTTTATGCAAGGACTAGATGGGAAGAGTATAGTTTGATCCCTTCATCTGAGATATGTTTGAAAATTGAGCACACTGATCTCCCACTTTCCTACTATATTGGTGTTCTTGGTGTGTCAGGATTGACTGCTTATGCTGGCTTCTTTGAAGTAGGTTCTCCCCAAAAGGGAGATAATGTTTTTGTTTCAGCTGCCTCTGGTGCTATTGGTCAACTTGTTGGCCAATTCGCCAAGTTGAACGGTTGCTATGTTGTTGGAAGTGCAGGAAGCAAAGACAAGGTGGATCTTTTGAAGAATAAATTAGGATTTGATGAAGCTTTTAACTATAAGGAAGAGCCAGACCTCAATGCAGCTTTGAAAAGGTATTTTCCAGAAGGCATTGACATTTACTTTGAGAATGTTGGGGGCAAGACACTTGATGCAGTACTTCCAAATATGAGACTCCATGGTCGCATAGTTGTTTGTGGAATGATCTCACAATACAATCTTACTCAACCGGAAGGTGTAACAAATTTGGCACATCTCATATTTAAGAGGGTTAAAATGGAAGGTTTTCTTATAATTGATTTCTTCCATTTATTTCCCAAATTCTTGGAGTTTGTCGTGCCTCTAATTAGAGAAGGAAAGGTTGTGTATGTTGAAGACATTGTTGAAGGTCTTGAGAATGGCCCTGCAGCATTGGTTGGCCTCTTTAGTGGTCGCAATGTCGGCAAACAAGTGGTGGATGTTTCTCGGGAGTAA 1032 0.4138 MAELRNKQVILNNYVVGFPKESDMSIVEGTITLKVPEGSSDLLLKNLYLSCDPYMRFFMTKEDNPLGIGTYKLHSALRGDGVSQVVESGHPDYKKGDLVYARTRWEEYSLIPSSEICLKIEHTDLPLSYYIGVLGVSGLTAYAGFFEVGSPQKGDNVFVSAASGAIGQLVGQFAKLNGCYVVGSAGSKDKVDLLKNKLGFDEAFNYKEEPDLNAALKRYFPEGIDIYFENVGGKTLDAVLPNMRLHGRIVVCGMISQYNLTQPEGVTNLAHLIFKRVKMEGFLIIDFFHLFPKFLEFVVPLIREGKVVYVEDIVEGLENGPAALVGLFSGRNVGKQVVDVSRE* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0407 343 SUPERFAMILY GroES-like 290 338 IPR011032 -
Pvu10g0407 343 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 131 302 IPR036291 -
Pvu10g0407 343 SUPERFAMILY GroES-like 4 170 IPR011032 -
Pvu10g0407 343 Pfam N-terminal domain of oxidoreductase 7 113 IPR041694 -
Pvu10g0407 343 SMART PKS_ER_names_mod 42 338 IPR020843 GO:0016491
Pvu10g0407 343 Pfam Zinc-binding dehydrogenase 165 298 IPR013149 -
Pvu10g0407 343 Gene3D - 133 309 - -
Pvu10g0407 343 Gene3D - 9 338 - -
Pvu10g0407 343 CDD double_bond_reductase_like 5 340 - -
Pvu10g0407 343 PANTHER PROSTAGLANDIN REDUCTASE 1 342 IPR045010 GO:0016628
Pvu10g0407 343 PANTHER QUINONE OXIDOREDUCTASE-LIKE PROTEIN 1 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0407 Pvu-Chr10 5720600 5725519 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0407 K19825 - gmx:100812880 561.607