Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0405 AAAGAAAAGAATGGTGGGGGTGGGGGTCTGCTGCTTCTTTTTAAAAAAAGCGTTGTTACAAGCAACATTAAGTACCTAGATATTCATGGAAGCTCGGCATCAGAAGTTGCAGTGAAAATGAATTGTTGTCCGAAGCAGCAGTGCAGTGGAATAAGTTTGGAAGATTTGATGCTTACATATGAAACCAAACAAGCCCTGGCTTCATGCAACCACGTTCGAGGAATCGTGTCTGGTCTAGTTCAACCCAACAACTGCTTCTAA 261 0.4253 KEKNGGGGGLLLLFKKSVVTSNIKYLDIHGSSASEVAVKMNCCPKQQCSGISLEDLMLTYETKQALASCNHVRGIVSGLVQPNNCF* 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0405 86 PANTHER - 18 85 - -
Pvu10g0405 86 SUPERFAMILY Pectin lyase-like 16 86 IPR011050 -
Pvu10g0405 86 PANTHER PECTIN LYASE SUPERFAMILY PROTEIN 18 85 - -
Pvu10g0405 86 Pfam Glycosyl hydrolases family 28 17 73 IPR000743 GO:0004650|GO:0005975
Pvu10g0405 86 Gene3D - 3 85 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0405 Pvu-Chr10 5703841 5704101 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0405 21 83 Glycoside Hydrolase AT2G43870 50.794 7.38e-19 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0405 K01184 - gmx:100784002 105.916