Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0404 ATGGCAGAAGTGAGGAACAAGCAAGTGGTTCTGAGAGACTATGTGGTTGGTTTTCCCAAGGAATCCGACATGAACACTGTCGAAGGAAGCATAACATTGAAGGTTCCAGAAGGTTCCAATGATGTGCTCCTCAAAAATCTCTACCTCTCTTGTGACCCTTACATGAGAATGCTGATGAGCAAGATAGACCAGGAAGGATTTGGGAGCTACACACCTGACTCTCCATTATCAGGATATGGGGTGTCAAAAGTTGTAGAATCTGGACACCCAGATTACAAGAAAGGTGATTTAGTTTGGGGAATTACGAAATGGGAAGAATTCAGCTTGGTGCCTGCAGCTCAAATACGAACCAAAATTGAGAACACTGATGTCCCACTTTCATATTACACTGGTATTCTTGGTATGCCAGGAATGACTGCTTATGCAGGTTTCTTTGAACTAGGCTCTCCCAAGAAAGGAGAGAATGTTTTCGTTTCAGCTGCTTCTGGTGCTGTTGGTCAGCTTGTTGGTCAGTTTGCTAAATTGACTGGTTGTTATGTGGTTGGAAGTGCTGGAAGCAAAGAGAAGGTGGATCTTCTGAAGAATAAATTTGGATTTGATGAAGCTTTTAACTACAAAGAAGAGTCAGATCTCAATGGAACTTTGAAAAGATACTTTCCAGAAGGCATTGATATTTACTTTGAGAATGTTGGAGGCAAGACACTTGATGCTGTACTCCCTAATATGAGACTCCATGGTCGCATACCTGTTTGTGGAATGGTCTCACAGTACAATCTCATAGAGCCTGAAGGTGTAACAAATTTGACAAATCTCATATTTAAGCAAATTCGAATGGAAGGTTTTATTGTTTCCAAATTCTATCACCTATATTCCAATTTCTTGGAGTTCGTCCTGCCTCATATTAGAGAAGGGAAGGTTGTGTATGTGGAAGACATTGTTGAGGGTCTTGAGAATGGCCCTGCAGCCTTGGTTGGCCTCTACACTGGTCGAAATGTTGGTAAACAAGTGGTTGTTGTTGCTCGTGACTGA 1029 0.4189 MAEVRNKQVVLRDYVVGFPKESDMNTVEGSITLKVPEGSNDVLLKNLYLSCDPYMRMLMSKIDQEGFGSYTPDSPLSGYGVSKVVESGHPDYKKGDLVWGITKWEEFSLVPAAQIRTKIENTDVPLSYYTGILGMPGMTAYAGFFELGSPKKGENVFVSAASGAVGQLVGQFAKLTGCYVVGSAGSKEKVDLLKNKFGFDEAFNYKEESDLNGTLKRYFPEGIDIYFENVGGKTLDAVLPNMRLHGRIPVCGMVSQYNLIEPEGVTNLTNLIFKQIRMEGFIVSKFYHLYSNFLEFVLPHIREGKVVYVEDIVEGLENGPAALVGLYTGRNVGKQVVVVARD* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0404 342 CDD double_bond_reductase_like 4 339 - -
Pvu10g0404 342 SUPERFAMILY GroES-like 4 169 IPR011032 -
Pvu10g0404 342 SMART PKS_ER_names_mod 22 337 IPR020843 GO:0016491
Pvu10g0404 342 Gene3D - 132 308 - -
Pvu10g0404 342 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 131 302 IPR036291 -
Pvu10g0404 342 Gene3D - 8 337 - -
Pvu10g0404 342 Pfam N-terminal domain of oxidoreductase 7 115 IPR041694 -
Pvu10g0404 342 Pfam Zinc-binding dehydrogenase 164 297 IPR013149 -
Pvu10g0404 342 PANTHER QUINONE OXIDOREDUCTASE-LIKE PROTEIN 1 341 - -
Pvu10g0404 342 PANTHER PROSTAGLANDIN REDUCTASE 1 341 IPR045010 GO:0016628
Pvu10g0404 342 SUPERFAMILY GroES-like 288 337 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0404 Pvu-Chr10 5687068 5689841 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0404 K19825 - gmx:100811802 608.601