Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0403 ATGTTTGGTATCATATCATGGCTGGGACAAATCTTCTTCAAGTTACTTGGTACGGAGTGGAGGAAAAAGCAAATTAAAAAGATAACAGACCAAGTTTTTGACCAACTCAAGAATGAAGAGCAATCTGATAACTTGAGTTTTCGAGATATCTATATTGCTACTTTACTTGTGTACAATGGTATCAACAAGTATATTCCTGGTCCCCATTGTGATCCTCCTTCAAAAGACACAGTCAAACAATTCATTAAGAAATGTGATCACAACAAGGATGATCAAATTGATCGTGATGAATTTTTCGGTTTCATTAAGCAAATGGCACCTGAAACATTCAATGTTGTTCGTAGAAAACTTGTAGCCACTTTGGTTGTTGCACCAACAGTTGCAGCAACAACAAAAAAAACTACTGAACATGTACCAGGTGTTGGGAAACTGGTGCAAAGGTTACCTAAAGCAGTTTATGTTGCCCTTTTGACAATTGCAGCTGTGTGGTTCCAAGAGAACAATCAGGATTCTTAG 516 0.374 MFGIISWLGQIFFKLLGTEWRKKQIKKITDQVFDQLKNEEQSDNLSFRDIYIATLLVYNGINKYIPGPHCDPPSKDTVKQFIKKCDHNKDDQIDRDEFFGFIKQMAPETFNVVRRKLVATLVVAPTVAATTKKTTEHVPGVGKLVQRLPKAVYVALLTIAAVWFQENNQDS* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0403 171 SUPERFAMILY EF-hand 30 111 IPR011992 -
Pvu10g0403 171 ProSiteProfiles EF-hand calcium-binding domain profile. 73 108 IPR002048 GO:0005509
Pvu10g0403 171 PANTHER S100 CALCIUM-BINDING PROTEIN 12 170 - -
Pvu10g0403 171 Gene3D - 12 117 - -
Pvu10g0403 171 PANTHER CALCIUM-BINDING EF HAND PROTEIN 12 170 - -
Pvu10g0403 171 ProSitePatterns EF-hand calcium-binding domain. 86 98 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0403 Pvu-Chr10 5682847 5686192 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0403 8 171 EF-hand Containing Proteins AT1G64850 54.878 4.91e-64 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0403 - - vun:114167513 236.884