Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0402 ATGAGACAGAGTAACCTTGTTTCAGTTGGTTGGTATCACACCATGGGACAAGTCTTTGACAAGTTAGATGGTAAGGAGTGGAGGAAAAGGCAAATAAGAAAGATAACAGATCGAGTTTTTGACAAAGTACAGAATCAAAAGGAAACTGAAAACTTGAGTTTTCAAGATCTGTATATTGCTGTTTTACTTGTGTACAATGATATCAACAAGTATATACCTGGTCCCCATTTTGACCCTCCATCAAAAGCCAGAGTCAAAGAAGTCAAAGAGAATTGTGATATCAACCTTGATGGGGATATTGACCGTGAAGAATTCTTTGATTTCATTCTGCAAATGACAGCTGATACATTCACTGTTGTTAGCCAAAAACTTATTGTCACTTTGGTTGTAGCACCAACAGTGGCAGTGGCAACAAAGAGAGCCACTGAGGGTGTTCCAGGTGTTGGGAAACTGGTGAAGAAGATACCCAATTCAGTTTATGCTTCCCTTGTGACCATTGCAGCTGTGTGGTTCCAGAAAAAGGCTCAAAGTTCTTCACTGTAG 543 0.3996 MRQSNLVSVGWYHTMGQVFDKLDGKEWRKRQIRKITDRVFDKVQNQKETENLSFQDLYIAVLLVYNDINKYIPGPHFDPPSKARVKEVKENCDINLDGDIDREEFFDFILQMTADTFTVVSQKLIVTLVVAPTVAVATKRATEGVPGVGKLVKKIPNSVYASLVTIAAVWFQKKAQSSSL* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0402 180 PANTHER CALCIUM-BINDING EF HAND PROTEIN 18 177 - -
Pvu10g0402 180 PANTHER S100 CALCIUM-BINDING PROTEIN 18 177 - -
Pvu10g0402 180 ProSiteProfiles EF-hand calcium-binding domain profile. 80 115 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0402 Pvu-Chr10 5672162 5676406 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0402 15 170 EF-hand Containing Proteins AT1G64850 67.308 1.68e-79 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0402 - - gmx:100526914 287.345