Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0399 ATGTCTTCGCAGCAGCAGCAAATGCAGAACAGTGGCGGCGGCGGCGGCATCCCGGTGAGCGAGGTTTTCTGGACCCTCGTCGATAAAGCCGACAAAAAGTTCTCCAAAATCAGAGACCTTCCGTTTTACCAGCGCAGCAGGCATGATACGTACTTTTACAAGGTGTTCAAGCTTTACACACAATTATGGAAGTTTCAGCAGGAGAATCGGCAGAAGCTAGTTGAAGCTGGGCTTAGGAGATGGGAAATTGGTGAGATTGCATCTCGCATTGGGCAACTGTATTTTGGGCAGTACATGCAAACAAGTGATGCAAATTATCTTTCAGAGTCATATATATTCTATGAGGCCATATTGACTCGGGAGTATTTTAAGGAGGGATTGTTTCAGGATGTGAATATTGCAAACAAACAATTGAGGTTTCTTGCTAGATTCATAATGGTGTGTTTGGTTTTGAATCGAAGGGAAATGGTACAGCAATTGGTTAATCAGCTTAAAGTATTAGTTGATGAATGCAAGAGAGCATTCCAGGAAAGTGATTTTAAAGAATGGAAGCTGGTGGTTCAAGAAATACTCAGGTTTTTAAAAGCTGACACCGCATATATGAATCTCAGGCCCTTAAGATACAGTCTAGTTTTGGACCCTCATCCTGATACCTTGCCACATGTTGCTGCAGCCATTACAAAGCGACATTTGAAACTACGGGATGCTGTATTAAGTAGCTTCCATCAAAATGAGGTAAAGTATTCAGAGCTCACAATTGACACTTTTAGGATGCTTCAATGTTTGGAGTGGGAACCTAGTGGCTTATTTTACCAGTCTAGTGGTTCAAAACTTAGTCAGAATGGAGCTACTGGGACTAGTCGTATCAGCTACATCCAAGACATTGCGGACCCTACTTTACCAGCCAATCCACGGAAAGCTGTGTTATACTGTCCTACACTGACACATTTTATAGCTGTTCTTGCCACAATATGTGAGGAGCTTCCTTCTGATGGTATTCTCCTTGTGTATTTGTCAGCTTCAGGATATTGTAGTGCTCCTCATAATGAATCTGGTTGCATACACTTTGGTCCTCATGGAGATAGAGGATCAAACTGCATATATCCTTCTGACTTTCTACCATTTACTAGAAGACCACTTCTTTTAGTCATTGATAATGACAACAGCCAAGCATTTAAGGTCATAGCAGACGCAGAAAAGGGTGAGCCAGTTGCAATGCTCCTTTCACCAAGCTGTTCTCCTGTTGTGTCTGACTGCTCACATCATTCAAATGGGAGCCTATTCACCATGTTTCTTACAGCTCCGCTGCAAGCTTTCTGTCTTCTGATAGGACTTTCAGGCACTGATATTGATTTGGACACATTCAACAAAGCTGAAACGTTACTCACATCTTCACTAAATAACTGGGGGCTAGCATTGGCAATATCAGACACACTTAATCCTGTTTGGGGGCAGATTTTAGGTGATCCCTTCATAAGGAGGCTTCTTTTGAGATTCATATTTTGTCAGGCAGTGTTGACCCTATATGCACCAGTTTACAATGAAAACAAATTCCTTCCGACATGTGTCCCTTCTCTTCCGATGCCTGTCCTGCAACCAAGTTACTCATATCAGAGTGTAATTCTGAATTTAGCCAGCATGTTTGGTACAACTAAGTATTTCGTCTTCTCAGAGGATGTTCTTCCTGAAAATTTACAAGCCAACATGAATCAGTTGAACCTATGA 1725 0.4203 MSSQQQQMQNSGGGGGIPVSEVFWTLVDKADKKFSKIRDLPFYQRSRHDTYFYKVFKLYTQLWKFQQENRQKLVEAGLRRWEIGEIASRIGQLYFGQYMQTSDANYLSESYIFYEAILTREYFKEGLFQDVNIANKQLRFLARFIMVCLVLNRREMVQQLVNQLKVLVDECKRAFQESDFKEWKLVVQEILRFLKADTAYMNLRPLRYSLVLDPHPDTLPHVAAAITKRHLKLRDAVLSSFHQNEVKYSELTIDTFRMLQCLEWEPSGLFYQSSGSKLSQNGATGTSRISYIQDIADPTLPANPRKAVLYCPTLTHFIAVLATICEELPSDGILLVYLSASGYCSAPHNESGCIHFGPHGDRGSNCIYPSDFLPFTRRPLLLVIDNDNSQAFKVIADAEKGEPVAMLLSPSCSPVVSDCSHHSNGSLFTMFLTAPLQAFCLLIGLSGTDIDLDTFNKAETLLTSSLNNWGLALAISDTLNPVWGQILGDPFIRRLLLRFIFCQAVLTLYAPVYNENKFLPTCVPSLPMPVLQPSYSYQSVILNLASMFGTTKYFVFSEDVLPENLQANMNQLNL* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0399 574 Coils Coil 157 177 - -
Pvu10g0399 574 PANTHER PROTEIN SCAI 6 342 - -
Pvu10g0399 574 PANTHER PROTEIN SCAI 348 566 - -
Pvu10g0399 574 PANTHER TRANSDUCER, PUTATIVE (DUF3550/UPF0682)-RELATED 6 342 - -
Pvu10g0399 574 PANTHER TRANSDUCER, PUTATIVE (DUF3550/UPF0682)-RELATED 348 566 - -
Pvu10g0399 574 Pfam Protein SCAI 26 348 IPR022709 GO:0003714|GO:0006351
Pvu10g0399 574 Pfam Protein SCAI 353 510 IPR022709 GO:0003714|GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0399 Pvu-Chr10 5637297 5649562 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0399 - - gmx:100810202 1049.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0399 10 5637297 5649562 Pvu10g0399 10 5637297 5649562 ECH