Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu10g0384 | ATGGCGGAGCAGCAAGAGAAGCTTCACATTGTGGTGTTTCCATGGCTAGCATTTGGTCACATGCTCCCATTTTTGGAGCTTGCAAAACTCATAGCTCAAAAGGGTCACAAAATTTCTTTCATTTCCACACCTAGAAATATCCATCGTCTACCCAAAGTGCCTGAAAACTTGCAACCTTTGGTGGATCTGATAGAACTCCCACTGCCCCGTGTTGACAAACTCCCAGAAAATGCAGAGGCCACTGTTGACATTCCTCACCACATCATTCCATACCTCAAGCTGGCTTTTGATGGTCTTGAACAACCTTTGACCAAGTTTCTGGAGAGATCCAAACCCCATTGGATAATATACGACTTTGCACCTTATTGGTTGCCACCGATATCTTCTAAGCTAGGAATCTCATGCGTCTCATTCTGTATTTTTAGTGCATCTGGTATGTATTCTTTTTCGGATTTTTTTACAAGAAAAGAAAGTGAGTCCCCGCGGAGCAAAGGTATTCCCGAAGAGCATAATGAAAATGATGAATCGGGGGTTTCAGATATGTTTCGAGTCCTTAGAACTTCTAATGGTGCTCAAGTTATTGCTTCAAGAAGCTGCATGGAGATTGAAGGTGAGCCTCTCAAATTGTGTGAAAGTATATATAGGAAAACAGTGATTCCAGTTGGTTTATTGCCACCTTCATTACAGTTCAGTGAAGACAGCAATGATGAAAACTGGAATACCATCCTTAATTGGTTAGACAAACAGGAAAAAGGGTCAGTGATTTATGTAGCTTTTGGATCTGAAGTGACACTAAGTGATGAGGACTTCACTGAAATTACTATGGGAATAGAAATGTCTGGTTTTCCTTTTTTTTGGGTTCTGAAGAAGCAAAACACCTCTAGCGTTGAGTTGCAGGATGTGGTTGTGAATAACTCAGGAAAGGGTATGGTGTGGACAACATGGGCCCCACAGATGAGGATTTTATCACACAAGTCTATTGGGGGGTTCCTGACTCACTGTGGTTGGAGTTCAGTGATTGAGAGTCTTCAAATTGGGTGTCCACTTGTTATGTTGCCCTTCCAAAATGAACAATTTATAGTTGCTAGGCTTATGGAGGAGAAAAAGGTAGGGTTCAAAGTAGAGAGAAATGAGCATCATGGGAAGTTCACAAGGGAATCATTGGCCATAGCATTGAGATCAGTGATGTTGGAAGAAACTTATAGAAGTGAAGCACAGGAGATGAGTAAGATATTTGGGGACAAAGAACTGCACCAAAAATACATTGATCACTTTGTTGATTACATGGAAATCCATAGGCCTACCATGAAAGATTAG | 1317 | 0.4131 | MAEQQEKLHIVVFPWLAFGHMLPFLELAKLIAQKGHKISFISTPRNIHRLPKVPENLQPLVDLIELPLPRVDKLPENAEATVDIPHHIIPYLKLAFDGLEQPLTKFLERSKPHWIIYDFAPYWLPPISSKLGISCVSFCIFSASGMYSFSDFFTRKESESPRSKGIPEEHNENDESGVSDMFRVLRTSNGAQVIASRSCMEIEGEPLKLCESIYRKTVIPVGLLPPSLQFSEDSNDENWNTILNWLDKQEKGSVIYVAFGSEVTLSDEDFTEITMGIEMSGFPFFWVLKKQNTSSVELQDVVVNNSGKGMVWTTWAPQMRILSHKSIGGFLTHCGWSSVIESLQIGCPLVMLPFQNEQFIVARLMEEKKVGFKVERNEHHGKFTRESLAIALRSVMLEETYRSEAQEMSKIFGDKELHQKYIDHFVDYMEIHRPTMKD* | 439 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu10g0384 | 438 | PANTHER | EG:EG0003.4 PROTEIN-RELATED | 3 | 161 | - | - | |
| Pvu10g0384 | 438 | PANTHER | EG:EG0003.4 PROTEIN-RELATED | 169 | 435 | - | - | |
| Pvu10g0384 | 438 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 4 | 415 | - | - | |
| Pvu10g0384 | 438 | Gene3D | Glycogen Phosphorylase B; | 1 | 245 | - | - | |
| Pvu10g0384 | 438 | Pfam | UDP-glucoronosyl and UDP-glucosyl transferase | 253 | 417 | IPR002213 | GO:0008194 | |
| Pvu10g0384 | 438 | Gene3D | Glycogen Phosphorylase B; | 246 | 414 | - | - | |
| Pvu10g0384 | 438 | CDD | GT1_Gtf-like | 8 | 410 | IPR002213 | GO:0008194 | |
| Pvu10g0384 | 438 | ProSitePatterns | UDP-glycosyltransferases signature. | 315 | 358 | IPR035595 | - | |
| Pvu10g0384 | 438 | PANTHER | UDP-GLYCOSYLTRANSFERASE 91B1 | 3 | 161 | - | - | |
| Pvu10g0384 | 438 | PANTHER | UDP-GLYCOSYLTRANSFERASE 91B1 | 169 | 435 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu10g0384 | Pvu-Chr10 | 5415483 | 5417072 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pvu10g0384 | 7 | 433 | Glycosyltransferase | AT2G22590 | 45.316 | 2.98e-135 | 395 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu10g0384 | - | - | lja:Lj0g3v0150839.1 | 635.565 |