Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0382 ATTGGAGGAAAAATAGTTGCACCTGCGAAGAATAAATGGGTATCTTATTATTTTACTTGGATCTTGATGTCAAATGTGAATGGTCTCATAGTTGATGGAAGAGAAGGATTATTAGATGGCTTAGGTTTTACTTGGTGGCCATGCAAAGCTTGTCAACGACCATCGGTGATTAGTTTCAATGCATGCAATGATCTTAGGGTTAGTTACTTGAGAATTGTGAACAGTCCAAGATCTCACATAAACGTGAATGATTGTGTGAATGCCATTTTCTCTGCTATCACTATTCATTCTCCTGCTAACTCTCCCAACACTGATGGATTTAATGTCTATGCTTCCAAAAATATCTGGATCAGAGATTCAACTATAGCATCTGGTGATGATTGTATTGGCATCAGTGGTAACTCCTCTTATATCAATGTTACTGAGATTGCTTGTGGACCAGGCCATGGAATAAGCATTGGCAGCTTGGGTAGAGGCAATGATAATACAGCAGAACAAATTTATGTACGAAACTGCAGCTTCACCAATACAACAAATGGAGCAAGAATAAAGACATTTCCTAATGGATCAGGTTATGCAAGAGAAATCACTTTTGAGGAAATTAAATTGATAAAAGCTGGGAACCCAATAATCATTGACCAATTCTATAATGATTATTCTCCAAAGGATGAAGGTGTAGAAGTGAGTGGAATCACATTTCGTGGATTTGATGGAACATGTGTGCGTGATAAAGCAATTACCTTAAATTGTGGTCCACAAGGTTGTTTCAACATTACATTGGATGAAATTAAGATTGTGTCTCATGAAGAAGGAAAGCAAGTTTATTGTTCTGGGAAGAATGCCCATGGAACAGTTACAGCTACCACTCCAAACTGTTCCTGCTTATCGCCATGA 894 0.3792 IGGKIVAPAKNKWVSYYFTWILMSNVNGLIVDGREGLLDGLGFTWWPCKACQRPSVISFNACNDLRVSYLRIVNSPRSHINVNDCVNAIFSAITIHSPANSPNTDGFNVYASKNIWIRDSTIASGDDCIGISGNSSYINVTEIACGPGHGISIGSLGRGNDNTAEQIYVRNCSFTNTTNGARIKTFPNGSGYAREITFEEIKLIKAGNPIIIDQFYNDYSPKDEGVEVSGITFRGFDGTCVRDKAITLNCGPQGCFNITLDEIKIVSHEEGKQVYCSGKNAHGTVTATTPNCSCLSP* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0382 297 Pfam Glycosyl hydrolases family 28 18 277 IPR000743 GO:0004650|GO:0005975
Pvu10g0382 297 SUPERFAMILY Pectin lyase-like 2 295 IPR011050 -
Pvu10g0382 297 ProSitePatterns Polygalacturonase active site. 142 155 IPR000743 GO:0004650|GO:0005975
Pvu10g0382 297 Gene3D - 1 294 IPR012334 -
Pvu10g0382 297 PANTHER - 2 295 - -
Pvu10g0382 297 PANTHER PECTIN LYASE SUPERFAMILY PROTEIN 2 295 - -
Pvu10g0382 297 SMART pbh1 164 185 IPR006626 -
Pvu10g0382 297 SMART pbh1 223 245 IPR006626 -
Pvu10g0382 297 SMART pbh1 85 111 IPR006626 -
Pvu10g0382 297 SMART pbh1 112 133 IPR006626 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0382 Pvu-Chr10 5390515 5393522 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0382 1 292 Glycoside Hydrolase AT5G17200 41.693 1.58e-77 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0382 K01184 - gmx:100801217 402.905