Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0380 ATGGCTTTGCAGTTTCTGAAGCACCCTGTAACCATTTCACGAGGTTTTCACAATGAAACAACGTTAGCTTTTCTTTCTCGGCTTCGAATTCCGAAGCGCCAATTCTTAGTGAGATGGGGCAGAGCTCAGATTCCAACTTCTTTCAGGAGTTATGCTACTGTAAAATCTGGAAAGGTTTTATCAGTGAAGAAGAAAAAGCGGCTGGATGAAATATGTCTTGAAAAATATCAGCAATACAGTAGATCTGTCATCCAATCATGGATTTTGCAAGGCAAAGTATATGTGGACGGGAAGGTGATAAATAAAGCTGGTACCCCTGTGCCTGAAAAGGCTGTTGTGGAGATAATAGCCGATGTTCCCAAATATGTATGTAGAGCTGGACATAAGTTGGAAGCTGCCATCGAACAGCTTGGTGTTGATGTTACTGGTAAAGTAGCCCTTGATTCTGGGCTTTCAACTGGAGGATTTACTGACTGCTTACTTCAGTATGGTGCATCACATGTTTATGGAGTTGACGTAGGTTATGGACAGGTAGCTGACAAAATTCGAAGAGATGAACGTGTATCAGTGATAGAACGGACAAATTTAAGATATCTTACTGATCTCCCACAAAATGTTGATTTGGTGACTTTAGACCTCTCATTCATCTCTATTCTCCTGGTCATGCCTGCTGTGGTCAATGTCATGAAGGAAAATGCAGCATTAGTGACTTTGGTTAAACCACAATTTGAAGCTCGTAGATCTCAAGTAGGAAAAGGAGGGATAGTGAAAGATCCCATTGTCCATCAAGAGGTCCTTGAGAGAATTATAACGGGAGTAGAGAAATTTGGTTTCTGTTGTAAAGGTTCGATTGAGTCTCCTCTGAAAGGTGCCGAGGGTAATACAGAATTCCTTGTTCACTTCAACAGAATCCAAATTAAAGGTTCTGAAGATCTGGAGTAA 942 0.4108 MALQFLKHPVTISRGFHNETTLAFLSRLRIPKRQFLVRWGRAQIPTSFRSYATVKSGKVLSVKKKKRLDEICLEKYQQYSRSVIQSWILQGKVYVDGKVINKAGTPVPEKAVVEIIADVPKYVCRAGHKLEAAIEQLGVDVTGKVALDSGLSTGGFTDCLLQYGASHVYGVDVGYGQVADKIRRDERVSVIERTNLRYLTDLPQNVDLVTLDLSFISILLVMPAVVNVMKENAALVTLVKPQFEARRSQVGKGGIVKDPIVHQEVLERIITGVEKFGFCCKGSIESPLKGAEGNTEFLVHFNRIQIKGSEDLE* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0380 313 SUPERFAMILY Alpha-L RNA-binding motif 61 243 - -
Pvu10g0380 313 PANTHER BACTERIAL HEMOLYSIN-LIKE PROTEIN 63 306 - -
Pvu10g0380 313 Pfam FtsJ-like methyltransferase 122 302 IPR002877 GO:0008168|GO:0032259
Pvu10g0380 313 PANTHER BACTERIAL HEMOLYSIN-LIKE PROTEIN 63 306 IPR004538 GO:0003723
Pvu10g0380 313 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 301 IPR029063 -
Pvu10g0380 313 Gene3D - 55 117 IPR036986 GO:0003723
Pvu10g0380 313 SMART s4_6 66 131 IPR002942 GO:0003723
Pvu10g0380 313 Pfam S4 domain 67 113 IPR002942 GO:0003723
Pvu10g0380 313 CDD S4 66 115 - -
Pvu10g0380 313 Gene3D Vaccinia Virus protein VP39 118 312 IPR029063 -
Pvu10g0380 313 TIGRFAM tly: TlyA family rRNA methyltransferase/putative hemolysin 67 296 IPR004538 GO:0003723
Pvu10g0380 313 CDD AdoMet_MTases 147 226 - -
Pvu10g0380 313 ProSiteProfiles S4 RNA-binding domain profile. 66 126 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0380 K06442 - gmx:100781303 534.258