Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0379 ATGGACTTAAAAGGTGCTGTTAAGGAGATAATCCCTTGGGATGGAACTCTATCTTCAACTGATTTCCTCCTTTCTGCTCGTACATTTTCTGAGAAGTGGAAAATGTTCAATCCTTCCTTTCCCCCATGGCACTGGATCCCGTGTTCAAAACATCATTTGGTTGCTTCTCATAAGGTGGAAGGATACTTGTCCCTGGACAACATGTGCCATATCAAAAAATCATGTGAGGAAGAAGAGAGTAATAGAAGTCTGACATCGAAAGAAGAGAGCAACAATTCACAGAGAGAAGAGCCCTTTGATTGTGGCACTTTAGTATGTCCAGAGCATGAAGTAAACCACTATGATTTTCACATCATCTACAGTTCTTCATATAGGGTTCCAGTCTTGTATTTTCGTTCATACCATAGTGATGGGCAACTATTGCCGCTCAATGAAATTGAAAAGGACCTTCCCGGTCACTCTGCAAAGATACTATCAGAATCCAAATGGACATTTATAACTCATGAGGAGCATCCATATTTGAACAGGCCATGGTACAAATTACATCCATGTGGTACGAGTGAATGGATGAAGCTACTCTATGAAGGTGATTCATCTTTGAACAGAAATGGTTTTATTATTGAACACTATTTGGTTTCCTGGTTCTCGGTCATTGGACAAGTAGTTGGTCTTAAAATTCCTTTGGAAATGCTGGATACTGTAGTTTCTAACGCTTCTTAG 720 0.3986 MDLKGAVKEIIPWDGTLSSTDFLLSARTFSEKWKMFNPSFPPWHWIPCSKHHLVASHKVEGYLSLDNMCHIKKSCEEEESNRSLTSKEESNNSQREEPFDCGTLVCPEHEVNHYDFHIIYSSSYRVPVLYFRSYHSDGQLLPLNEIEKDLPGHSAKILSESKWTFITHEEHPYLNRPWYKLHPCGTSEWMKLLYEGDSSLNRNGFIIEHYLVSWFSVIGQVVGLKIPLEMLDTVVSNAS* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0379 239 Pfam Autophagocytosis associated protein, active-site domain 29 227 IPR007135 GO:0019787
Pvu10g0379 239 PANTHER UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 10 230 IPR007135 GO:0019787
Pvu10g0379 239 Gene3D - 47 225 - -
Pvu10g0379 239 PANTHER AUTOPHAGY-RELATED 10, ISOFORM B 10 230 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0379 K17888 - gmx:100786914 426.017