Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0378 ATGAGTCAAGCAAAGCGAAAGAAAGAAACAAATCTTACCTGGAATCATTGTGAGAGTGTTCCTCCTCATAGACTTCTAGTTAAATGTAAGTATTGTTCACATACTTGTTGGGGTGATGTTGCAAGAATAAAGCATCATCTTGCTGGTACAAAGGAGAACGTCATTGTGTGTACATCAGTTCCAGATGATGTTAAAGACATGTTTATGAAGTTATTAGAAGATAAAGAGAAAAGGTGGATATCAAAGATAAGAAAGGGACGTTGGAGTCATTTTCCAAGAAAGAAAAACAAAAAAACCATGAATGAAATGTTTAAAGATAGAGAGTTGGTGATTATAGACATTTGCAAATGCATATATGGTAATGCTTTACCATTTAATTTGGTAAGAAGTTCCTTATTTGTTCAAATGTTAAAATTTGTTGCTGAATATGGAAACGGTCTAAAGCCTCCTACTTATCATGAAGTTAGGGTGCCTTATTTGAAGAAGTCAGTTGACAAAATCCAAGTTAGTTTAGAGAAATATAGGGTTGAATGGAAGAAATGTGGTAATGTGGTCAAGGATGCCAAACAAATGTTTGAGCTATTAGATTTTGTGGTAGAAGAAATTGGGGAGGATAATGTTGCGCAAGTTGTGACTGATGGTGCTTTTAATTTTGTGGCAATAGGACAAATGTTAGAGGAAAAGAGAACAAAATTATTTTGGTCTCCTTGTGCAGCTCATTGCCTTGATTTGATTCTTGAAGACATTGGTCAGCTCCCAGTATTTTATAATACCATTGCAAATGCAAAAAAGATCACAACTTTCATTTATAGGCACACATGGGTCCTAAACTTATATAGGAAGTATTCCAAAGGAAAAGAATTAACTCGACCAGTAGTCACAAGATTTGCAACTGCTTTTCTTACCCTACAATCCATAGCACAACAGAAAAATGATATTCGAGGTATGTTTGTTTCACAAGAATGGACAACAAGTAATTATGCTAGTAAAAATGAAGCTATGGATAGAGCTAAAGAACAAATAGCCTCAAATTTCAAGAATGAAGACTCTCGATACAAAAAGGTGTGGAAAATAACTGATACTCGTTGGAATTTGCAATTACATAGGCCTCTTCATGCTGCTGCTTACTACCTTAATCCTAAACCATTGAAAAAAATGATCCTGGATAGAAGGATTAGATTTCAACTTGATCAACAACTTGACAAATTCAAAAGAGCACAAGGATTATTTGGAAGAAGCATGGCAATAGATACCAGGGATAAGAAGCATCTTGCTCTTTGGTGGGAAAGTTATGGTGGAAAGGGTAAAGAGCTACAAAATTTAGCAATAAGAGTTTTAAGTCTAACTTGTAGTGCTACTGGGTGCGAAAGAAATTGGAGCATATTTGATCAAGTGCATACTAAAAGAATGAATCACTTAGAACAACAAAGATTAAATGCCCTTGTCTTTGTTAAGTATAATCTTCAACTTGAGATGAGACAAAAGGGAGCTCCAAGCAGCAAAAGGAAGAGAGGTCCAAGAAATTTAACTACTAAAGTTGATAGAAAGGGAAAATCTACTGTAATTGCAAATGATAATGAGATTGAAGATATAGTTGAAGATGTGGAGGAAGAGGATGAAAATGAGCTCCAAGAGAATGTTATATTAGAGGAAGAAGATGATCTAAGTGACCTTGATCTCAGAAATGATGATTAG 1695 0.3487 MSQAKRKKETNLTWNHCESVPPHRLLVKCKYCSHTCWGDVARIKHHLAGTKENVIVCTSVPDDVKDMFMKLLEDKEKRWISKIRKGRWSHFPRKKNKKTMNEMFKDRELVIIDICKCIYGNALPFNLVRSSLFVQMLKFVAEYGNGLKPPTYHEVRVPYLKKSVDKIQVSLEKYRVEWKKCGNVVKDAKQMFELLDFVVEEIGEDNVAQVVTDGAFNFVAIGQMLEEKRTKLFWSPCAAHCLDLILEDIGQLPVFYNTIANAKKITTFIYRHTWVLNLYRKYSKGKELTRPVVTRFATAFLTLQSIAQQKNDIRGMFVSQEWTTSNYASKNEAMDRAKEQIASNFKNEDSRYKKVWKITDTRWNLQLHRPLHAAAYYLNPKPLKKMILDRRIRFQLDQQLDKFKRAQGLFGRSMAIDTRDKKHLALWWESYGGKGKELQNLAIRVLSLTCSATGCERNWSIFDQVHTKRMNHLEQQRLNALVFVKYNLQLEMRQKGAPSSKRKRGPRNLTTKVDRKGKSTVIANDNEIEDIVEDVEEEDENELQENVILEEEDDLSDLDLRNDD* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0378 564 MobiDBLite consensus disorder prediction 494 564 - -
Pvu10g0378 564 Coils Coil 532 552 - -
Pvu10g0378 564 PANTHER OSJNBA0013A04.12 PROTEIN 5 183 - -
Pvu10g0378 564 PANTHER OSJNBA0013A04.12 PROTEIN 332 534 - -
Pvu10g0378 564 PANTHER OSJNBA0013A04.12 PROTEIN 186 329 - -
Pvu10g0378 564 PANTHER OS05G0326663 PROTEIN 5 183 - -
Pvu10g0378 564 PANTHER OS05G0326663 PROTEIN 186 329 - -
Pvu10g0378 564 PANTHER OS05G0326663 PROTEIN 332 534 - -
Pvu10g0378 564 Pfam Protein of unknown function (DUF 659) 181 265 IPR007021 -
Pvu10g0378 564 Pfam hAT family C-terminal dimerisation region 422 488 IPR008906 GO:0046983
Pvu10g0378 564 SUPERFAMILY Ribonuclease H-like 183 493 IPR012337 -
Pvu10g0378 564 MobiDBLite consensus disorder prediction 527 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0378 Pvu-Chr10 5360493 5362875 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0378 - - pvu:PHAVU_010G036200g 1089.72