Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0376 ATGGAAGAGTCAGATTCCATGGCTACATCTACACTGATAGATTCTACAACTTCTAAGATACAGCAGCTGCAGAAGGCATTTGCTGAACTTGAAAGTTATCGGGCTGTTACTCTTAACATGAAATGGAAAGAACTAGAGGAACATTTCCATGGTCTTGAGAAATCCTTGAAGAGACGCTTTCATGAATTGGAAGACCAGGAGAAAGAGTTTGAAAACAAGACAATGAAAGCTCGTGAACTGTTGGAGAAGCGGGAAGCAGCTGTTTTTGCCAAGGAGCAAGATTCATTCCAGAGGATTCAAGAGAAAAGAGATGCTGCTGTATTTGCCATTGTAAATGCTCGAGAAAAACACAGGAAGATTTCATCACGTGAATTGGCTACTGTCATAAATGGTGATAAAGGAGGGATACTAGTTGTGGAGGAGAAACCTGTGGATACTGTGTCCACTGCAGCAGAAGGTAATGTGGAAGATGTAAAACTTCCTGAAAACAGAAATGTGGAGTTGATATCTTATCCAGAGTTGGTGAAATTATGCAAGGAGATGGATGCTGCTGGAATTCACAAATTCATATCTGATAACCGTAAGAACCTGGCAGCTGTAAGGGATGAAATACCAAATGCATTAAGAGCTGCTCCTAATGCTGCCCGTTTAGTTTTAGATTCTCTGGAAGGATTTTACTGTACAGAAGTGTCAAATCAGGATGTAAAGAAGGATGGTAACTTATTGGGTCTTCGCCGAAGTTGTATTATGCTGATGGAATGTCTCTGTGATTTCCTGAGCAACTCAGATTGTGTTTCTAATGTAACTTCAGAAGATATCAGAGACAGGGCAAAGGCAGTTGCTGAAGAATGGAAACCCAGATTGGACGCTCTTGACATGGATGCTAGCAATGGGAATTCCTTGGAGGCTCATGCATTTTTACAACTTGTTGCTAGTTTTGGTATTGCCTCTGATTTTGATGAGGAGGAGTTATCCAGATTGATTCCAATGGTATCTCGCCGCCGCCAAACTGCTGATTTATGTCGTTTCCTTGGGCTGTCAGAAAAGATGTCTGGTGTAATTGAGGTTTTGGTGAACAGTGGGCGGCAAATTGATGCTGTTAACTTGGCTTTTGCATTTGATCTTACTGAACAATTTTCTCCCGTTTCTTTACTGAAATCTTACTTGAAAGATGCAAGAAAAACTTCTTCTCCTGTTAAAAGTGTTAACTCATCTCCCACGGCACAGATTGAGGTTAATGAACGAGAGCTAGTTGCTCTTAAGGCTGTAATAAAGTGCATTGAAGAACATAAACTTGATGAGAAGTATCCTCTGGATCCTCTGCAGAAACGATTAGTACAGCTAGAGAAGGCGAAAGCTGACAAGAAGAGAGAAACTGAAGCAACAAAACCTCAACCCAAGAGACCCCGTGCAAATGGTGCGGGATACGGTCCACGTGTCACTAACATCCCCTTTGATAAAACTTCCTATGCTAGAGTTGCTGACAGGTACCCACAGTATGTATATGACCGACCACCGTACATGTACCCTGCACCAACTGATAATCATTGTCCCCCTCTCATGAGCACTGCAACCTATAACATCTCTCCCAACCTTGGCAACTACTTTGGAAATGGGTATCAGTACCAAGCCACTTATCTCCACTAA 1647 0.4208 MEESDSMATSTLIDSTTSKIQQLQKAFAELESYRAVTLNMKWKELEEHFHGLEKSLKRRFHELEDQEKEFENKTMKARELLEKREAAVFAKEQDSFQRIQEKRDAAVFAIVNAREKHRKISSRELATVINGDKGGILVVEEKPVDTVSTAAEGNVEDVKLPENRNVELISYPELVKLCKEMDAAGIHKFISDNRKNLAAVRDEIPNALRAAPNAARLVLDSLEGFYCTEVSNQDVKKDGNLLGLRRSCIMLMECLCDFLSNSDCVSNVTSEDIRDRAKAVAEEWKPRLDALDMDASNGNSLEAHAFLQLVASFGIASDFDEEELSRLIPMVSRRRQTADLCRFLGLSEKMSGVIEVLVNSGRQIDAVNLAFAFDLTEQFSPVSLLKSYLKDARKTSSPVKSVNSSPTAQIEVNERELVALKAVIKCIEEHKLDEKYPLDPLQKRLVQLEKAKADKKRETEATKPQPKRPRANGAGYGPRVTNIPFDKTSYARVADRYPQYVYDRPPYMYPAPTDNHCPPLMSTATYNISPNLGNYFGNGYQYQATYLH* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0376 548 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 8 548 - -
Pvu10g0376 548 Coils Coil 53 83 - -
Pvu10g0376 548 MobiDBLite consensus disorder prediction 451 465 - -
Pvu10g0376 548 Coils Coil 438 458 - -
Pvu10g0376 548 Pfam Frigida-like protein 170 459 IPR012474 -
Pvu10g0376 548 MobiDBLite consensus disorder prediction 451 479 - -
Pvu10g0376 548 PANTHER FRIGIDA-LIKE PROTEIN 8 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0376 Pvu-Chr10 5322226 5328430 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0376 - - gmx:100786746 975.696