Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0361 ATGAAGGGTGGACCCAAGAAAAAGGCCACCGCGGATGTTCCATCCGAGGTGGTTGAGCCTTCTGGGGCTGCGGATTCGGGAGGTGGAGAAGGTGGGAGTGGTCAAGTTGAAATCTTTGAGGGGAACGAGGGTACCCAGTTGCGGAACGGTGAGGATGAGGAACCTCAGGTGGAGGATTCTGAAGGGGAGGGCGAGGAAGGAGAAGGGGAAGGGGAAGAAGAGTATGGGTTGGAGGGAGATGAAGAAGAGGAAAATGTTGGTGGTACTTTTCCTGGGGCTCAAGGTGTTATTCTTGCTGAGAATTTTTATGAAGTTGAAGCTATACGTCGTAAGAGGGTGCGTAAGGGTCAGGTGCAATACTTTATCAAATGGAATGGGTGGCCTGAGACAGCCAACACTTGGGAGCCACCAGAAAATCTAGTTTCTGTTCCTGATGTTGTTGAAGCTTTTGAGGAGAGCTTGAAGTCAGGAAGACATCGTAAGCGCAAACGCAAGCATGTGGTGCATCATACTCAACCCAGGAAGCGGCTGGAGCGTTCTACCACTCCATACAGCCTTCGACGCTTTTCGACTAGTTCGGCTGGAAATCATACACAGTCTGCTCTACCTGTTCTTAGTGATGCAAGCCTTCCTGTTATTCCCGCCTTTCCTCAGACTGTTCTTTTTGCTGACGAATTGGGAAATGTTGCTGGCAGCAATCTTGAAAATGCCACACCTGTTAATGTTACCAAGTCAGCAATTGGTTCAGAACAAAATATTGAAAGGAATGAGGAAAATGATTATGATCCTAAGCTTAGTGAGCTTAAAGCTTCTTCTGCCTGTGGGAATGAAGCAGACAGGCTTGCAATACGAATTCCAGAAGCAATTCCTTCTGGTCCTGGGTTTGCTGGCAATAATGGTCAAACAGTTGCTAAATCAAAGGGGGTTCACATGGAAATAAGTGAAAGTGGCCGCTGTCGGGGAGCCAAAAGGAGAAAATCTGGTTCTGTAAGGAGGTTCAACAAAGAATTATATGCTGGTGAGCCTGCCAATACACAAAATCCAGTTGGAGTAGCTGTTAGTACAGCTGAGTCAGCACTACTAACAAGGAATGCTGGTACTGGTACTAATCATGCCAGACCTGCTAGCAACATCGTAAAGATTATAAAGCCAATAGGCTATTCAGCTACCGTATCCAGTGGAATGCAGGATGTTTTGGTAACCTTCGTGGCTTCAAAGTCTGATGGAACAGAAGTGATGGTTAACAACAAGTATCTAAAAGCATTTAATCCACTTCTTCTCATCAATTTCTATGAGCAGCATCTTCGCTACAGCCCTACATCTTGA 1326 0.463 MKGGPKKKATADVPSEVVEPSGAADSGGGEGGSGQVEIFEGNEGTQLRNGEDEEPQVEDSEGEGEEGEGEGEEEYGLEGDEEEENVGGTFPGAQGVILAENFYEVEAIRRKRVRKGQVQYFIKWNGWPETANTWEPPENLVSVPDVVEAFEESLKSGRHRKRKRKHVVHHTQPRKRLERSTTPYSLRRFSTSSAGNHTQSALPVLSDASLPVIPAFPQTVLFADELGNVAGSNLENATPVNVTKSAIGSEQNIERNEENDYDPKLSELKASSACGNEADRLAIRIPEAIPSGPGFAGNNGQTVAKSKGVHMEISESGRCRGAKRRKSGSVRRFNKELYAGEPANTQNPVGVAVSTAESALLTRNAGTGTNHARPASNIVKIIKPIGYSATVSSGMQDVLVTFVASKSDGTEVMVNNKYLKAFNPLLLINFYEQHLRYSPTS* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0361 441 SMART ChS_2 367 440 IPR008251 GO:0005634
Pvu10g0361 441 Gene3D - 63 155 - -
Pvu10g0361 441 MobiDBLite consensus disorder prediction 158 173 - -
Pvu10g0361 441 PRINTS Chromodomain signature 100 108 IPR017984 -
Pvu10g0361 441 PRINTS Chromodomain signature 113 127 IPR017984 -
Pvu10g0361 441 PRINTS Chromodomain signature 128 140 IPR017984 -
Pvu10g0361 441 ProSiteProfiles Chromo and chromo shadow domain profile. 103 162 IPR000953 -
Pvu10g0361 441 PANTHER CHROMO DOMAIN-CONTAINING PROTEIN LHP1 1 440 IPR044251 GO:0006325|GO:0031507
Pvu10g0361 441 MobiDBLite consensus disorder prediction 1 92 - -
Pvu10g0361 441 SMART chromo_7 102 155 IPR000953 -
Pvu10g0361 441 ProSitePatterns Chromo domain signature. 120 140 IPR023779 -
Pvu10g0361 441 MobiDBLite consensus disorder prediction 54 85 - -
Pvu10g0361 441 PANTHER CHROMO DOMAIN-CONTAINING PROTEIN LHP1 1 440 - -
Pvu10g0361 441 Pfam Chromo (CHRromatin Organisation MOdifier) domain 103 152 IPR023780 -
Pvu10g0361 441 SUPERFAMILY Chromo domain-like 95 158 IPR016197 -
Pvu10g0361 441 CDD CD_CSD 103 152 - -
Pvu10g0361 441 MobiDBLite consensus disorder prediction 158 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0361 Pvu-Chr10 5093161 5103616 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0361 - - gmx:100782342 536.954