Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0350 ATGGCTTCCCTCTCCCAAGGCGATCACCAACAGATTCTGGTGGAGCGCAAATTAAATGCGAGAGTTTTGACCCTAAACAGGCCTAAGCAGTTGAATGCCCTCTCTTTTTATATGGTTTCACGGCTGCTTGAAGTTTTTTCTGAGGATGAGGAAAATTCTGATATTAAATTGGTTGTCGTGAAGGGAAATGGAAGGTCTTTTTGTGCTGGTGGTGATGTGGCAGCTGTTGCTCGTGAAGGAAGTAAAGGTGACTGGAAGACTGGTGCCAAATTTTTCCTTACTGAATATAAATTGAATTACTTGATGGCAACATATAGTAAGCCCCAGGTTTCCATTCTTAATGGAATTGTTATGGGAGGTGGTGCTGGTGCTTCTGTACATGGAAGATTTCGTGTTGTTACAGAGAATACGGTCTTTGCAATGCCAGAAACTGCTTTGGGTTTATTTCCTGATGTAGGTGCCACATATTTCCTGTCTAGACTGCCTGGCTTTTTTGGAGAATATGTTGGTCTTACAGGTGCTAGGTTGGATGGTGCAGAAATGCTTGCTTGTGGTCTTGCAACACATTTTGTTCCTTCATCGAAATTGTCTTTATTGGAAGAAGAATTATGCAAGGTGGAAGCTAGTGATCCAAATGCAGTGTCTGTAATTATCGATAAGTACTCAGAGCAACCTTTCCTAAAAGATGACAGTGTTTATCACAGGATGGATGTGATCAACAAGTGCTTCTCAAGAAAATCAATTGAGGGAATAATATCTTCTCTTGAGATAGAAACTATGGGTAAGGCTGATCATTGGATTTCTGAAACTGTTCAAGCGTTAAAGAAAGCATCTCCAACAAGCCTGAAAATCTTTCTTAGATTGATTAGAGAAGTCAGGCTCCTGGGTATTGGTCCATGCCTTGTTCTTGAATATAGAACTGTTTGTCATATTCTCAAAGGACACTACAGCAAGGATTTCTTTGAGGGTTGTAGGGCTATACTGTTAGATAAGGACAGGAACCCAAAGTGGGAACCTTCCAAATTGGAGCTTCTTAGTGATAGAGATATCGACCGTTACTTCACTAAGCTTGAGGATGAAGAATGGGAAGATTTGGAACTTCCTAAAAGGTTTAACAATCTTCCTACATATGCTATTTCAAAGCTTTAA 1149 0.4038 MASLSQGDHQQILVERKLNARVLTLNRPKQLNALSFYMVSRLLEVFSEDEENSDIKLVVVKGNGRSFCAGGDVAAVAREGSKGDWKTGAKFFLTEYKLNYLMATYSKPQVSILNGIVMGGGAGASVHGRFRVVTENTVFAMPETALGLFPDVGATYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATHFVPSSKLSLLEEELCKVEASDPNAVSVIIDKYSEQPFLKDDSVYHRMDVINKCFSRKSIEGIISSLEIETMGKADHWISETVQALKKASPTSLKIFLRLIREVRLLGIGPCLVLEYRTVCHILKGHYSKDFFEGCRAILLDKDRNPKWEPSKLELLSDRDIDRYFTKLEDEEWEDLELPKRFNNLPTYAISKL* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0350 382 SUPERFAMILY ClpP/crotonase 9 340 IPR029045 -
Pvu10g0350 382 CDD crotonase-like 12 205 - -
Pvu10g0350 382 Pfam Enoyl-CoA hydratase/isomerase 21 354 IPR045004 -
Pvu10g0350 382 Gene3D - 6 369 - -
Pvu10g0350 382 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE 1 8 382 - -
Pvu10g0350 382 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 8 382 IPR032259 GO:0003860
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0350 Pvu-Chr10 4933602 4955706 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0350 3 382 Miscellaneous Gene Families AT5G65940 65.526 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0350 K05605 - gmx:100170729 637.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0350 10 4933602 4955706 Pvu10g0350 10 4933602 4955706 ECH