Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0349 ATGTCTTCAAGATCTGGTGGTAGTGCATGGCCTTACCCCATCAAAACGATCGTCGTTTTGGTTCAAGAAAACCGTTCATTTGACCACATGTTGGGTTGGATGAAGTCCCTCAACCCGGAAATCGATGGGGTCACCGGTTCGGAGTCAAACCCGATTTCCACCTTGGAGCCAAGCTCGAACCGGGTTTATTTTTCCGACAAGTCTGATTTTGTTGAACCGGACCCGGGTCACACGGTCGAGGATGTGTACGAGCAAGTTTTCGGCGAGCCATGGAGCGAGTCCTCGACGAGAAAGAAAGTGTCGGCGAGAATGGAAGGGTTCGCCCAAAACTCGGTGAAGCAAAAGAAGGGATCAACGGCGGAGACGGTGATGAACGGGTACAAACCGGATCTTTTACCGGTTTATAGAGAGTTGGTTAAGGAGTTTGCGGTGTGTGATCGGTGGTTTGCTTCGGTTCCCGGTCCGACCCAACCGAACCGGCTCTACGTTCACTCTGCGACGTCGTATGGGTTGACCACTCAGGACACGCAGAAACTCATTGGAGGTTTACCACAGAAGACTATATTTGATTCTTTGGACGAAAATGGGTTCAGTTTTGGAATATATTACCAATACCCACCATCCACTCTTTTTTATAGAAACCTGAGGAAAGTGAAATACATAGACAACTTTCATTTGTTTGATTTAAAGTTCAAGAAGCATTGTGAAGAAGGGAGATTGGAAAACTACGTGGTGATTGAGCAAAGATATTTTGAGTTGTTATCAGTGGCAGCAAATGATGATCATCCATCTCATGATGTTGGTGAGGGACAAAGGTTTGTGAAAGAAGTGTATGAGGCACTAAGAACAAGTCCTCAATGGAATGAAATATTGTTCGTGATTACATATGATGAACATGGAGGCTTCTATGATCATGTGCCAACACCTGTGGATGGAGTTCCAAACCCAGATGACATTGCAGGTCCTGCACCATTCAAGTTTCAGTTTGATAGACTGGGTGTTAGGGTTCCTACCATCATTATTTCTCCATGGATTCAAGCAGGAAAAGTGTTGCATGAACCTTCTGGGCCATTCCCAACATCACAGTATGAACATTCATCAATACCAGCAACTGTGAAGAAAATATTCAATCTTCCTCAGTTCTTGACAAAGCGTGATGCATGGGCTGGAACATTTGAAAATCTCTTATCTCTAACCACTCCACGTACTGATTGTCCAGTGAAAATGCCCGAGCCTGTGAAACTAAGAGAGGTTGGTGGTGATGAAAATGCAGAACTGAGTGAATTTCAGGAAGAACTGATATACATGACAGCAACTTTAAATGGGGATCATAATAAGAGTACATACCCCAAACTAACACAGAATTTAACTGTTTCAGAGGCAGTAAAATACTGTGAAGATGCATTTCAAACATTCTTGAATGAGTGTGAGAAAGCAAAGCAAAGCAGAATTGATGGATCTGAAATTGTTCATTGTGCAAAGCCACACACAGCTCCACAATCCAAAACTTTCTTGCACAACATCTTCTCTTGTCTATTATGTAAAGATTAA 1551 0.4333 MSSRSGGSAWPYPIKTIVVLVQENRSFDHMLGWMKSLNPEIDGVTGSESNPISTLEPSSNRVYFSDKSDFVEPDPGHTVEDVYEQVFGEPWSESSTRKKVSARMEGFAQNSVKQKKGSTAETVMNGYKPDLLPVYRELVKEFAVCDRWFASVPGPTQPNRLYVHSATSYGLTTQDTQKLIGGLPQKTIFDSLDENGFSFGIYYQYPPSTLFYRNLRKVKYIDNFHLFDLKFKKHCEEGRLENYVVIEQRYFELLSVAANDDHPSHDVGEGQRFVKEVYEALRTSPQWNEILFVITYDEHGGFYDHVPTPVDGVPNPDDIAGPAPFKFQFDRLGVRVPTIIISPWIQAGKVLHEPSGPFPTSQYEHSSIPATVKKIFNLPQFLTKRDAWAGTFENLLSLTTPRTDCPVKMPEPVKLREVGGDENAELSEFQEELIYMTATLNGDHNKSTYPKLTQNLTVSEAVKYCEDAFQTFLNECEKAKQSRIDGSEIVHCAKPHTAPQSKTFLHNIFSCLLCKD* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0349 516 PANTHER NON-SPECIFIC PHOSPHOLIPASE C3 10 498 - -
Pvu10g0349 516 SUPERFAMILY Alkaline phosphatase-like 181 354 IPR017850 -
Pvu10g0349 516 Pfam Phosphoesterase family 14 379 IPR007312 GO:0016788
Pvu10g0349 516 PANTHER NON-SPECIFIC PHOSPHOLIPASE C4-RELATED 10 498 IPR007312 GO:0016788
Pvu10g0349 516 Gene3D Alkaline Phosphatase, subunit A 9 189 IPR017850 -
Pvu10g0349 516 Gene3D Alkaline Phosphatase, subunit A 242 423 IPR017850 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0349 Pvu-Chr10 4913572 4916446 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0349 1 516 Acyl Lipid Metabolism Gene Families AT3G03530 59.369 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0349 K01114 - gmx:100789421 928.317