Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0346 ATGGATGAAATGCAGCAGAAGGAGGGAGGAGAGCTGGAGAGAGTGGAAGAAACGAAACTGTTTTGTGAGGAAATGAAAGAAGCTCAAAAAGCAGCCATGAAAAAACAATGGGAAGAGTTCAAGAAAATAATGATGGAAAAGCCAGAGAACATCCTCAAGCAGTTTGATCTGTTTGGGAACACTGCGATCCATGTTGCAACTCGCTCCCACACTCAACTCCTCTCAGAGTTCATAGAAATGGTGCCTGCAGAAGAAAGGTGGAACGCTTTGTGCAAGAAGAATGTTGAGGGAAACACTGTCTTGCACGAGATTGTGTTTTCCAAACATGCGCAGGAAATGGCTGATGTGGTGTTCAGATTTGAAGAGCAGTTGCTGACACCACAAAAGAATCCATTGCTGGAGCTCAGAAACAACGAAGGAGAAAGCCCTTTGTTCGTCGCTGCCATGCATGGAAAGCTGAAGATTCTCAAGTATATGGCTAACCGTGTTCAGAATCTTGGAGAACATTTTCGTCTATCTGATGACAAATATAATGCTCTTCATGCGAGTGTCATTGGCCAACATTTTCATGTTGCAATTTGGCTGGAAAGAATGGATGAAAACCTTTCTCTGGAAAAGGATGGGAAGGACTTAACATGTCTTCAACTACTTTCCAAAATGCCACAGGTTTTCCGAAGCTGTATTCACATGGGACCCTTGAAGAACACCATTTATCACTTGCTTCCTGATGAATATGATAATGATGAACACTCCCAGTTGTTTAAAAAGAAGGATGAAGAAAATGGTAAAGAGGATGAGCCTACACTCTTTAAATCAGCCATTTCAGAGATCAACTACAGGTTCTGGAAACACTTGGCCAAAGAGTTTGAAGGAATTGACCAAACGTGGAAGGAAAAGAAAAAACATAAGTTGGCTGAACATCTAGCGAGCACTTTAGTAACAAATGACTTATCATGGCAAGCATCAAAAAATAAGTATAATAGGACAATATTGATTACAATGCCACATGATCCTATAAATGTCGTAAAAAGGAAAAGAGTAAGTGTACGAAAAAGGGAAGAGAGGCGTAAGAAAACTGAAGAACGTCCAGAACGCACTGCACTCTTCTTAGCAACTAAAAATGGAATTGTAGAAATTGTTAATAAATTTCTTCAAGTGCATCCTGCAGCTATATATCATGTTACTGAGAAACAACACAACATATTGACCATGGTTGTTAAGTATCGACAGAGAAAAATTCTTAAACTAATAGAAAGAACAGGTACAATTGAATCATTGGTTGCTCAAATCACAGATAAAAGAAGAACTGTGTTGCATGAAGTTGCAAGAATGCATTACTACAAAGCAGAGCACTTAGCTGGAGTGGCATTCCATCTACAAGATGAGTTGCGTTGGTATGATAGGGTGAGAAGATTCACACCTAAACATTATAACATGCACTGTGACATAGATGGACACACACCAGAAGATATGTTAGAAATTGAGCATGATGGAATGCTTAAGGAGGCAAAAAAATGGTTAAAGGAAACAGCTCAATCATGCTCCACTGTTGCTATTTTGGTTGCTACAGTTGTATTTGCTGCTGCATACACCATTCCAGGGGGAACTGAAAATGGTACTCCTGTATTCATTCATTCAAGTGTGTTTCTATTTTTTACCATCATGGATGTTGTGGCTCTTGCTACCTCACTTGCTTCAGTCGTCATCTTCCTTTCCATCCTCACTTCCCCATGTGACTTATGGGATTTTCACAAGTCTCTCCCTCGAAAACTGAATTTGGGATTTGTTTTGTTGTTCTTTTCATTGTTGACAACAATGTTTGCTTTCAGTGCAACCATGTTGCTCACTATTCGATTGGAATGGAAGAAATGGACATTGATATACAGTGCAACTTTCTTTCCTGCCACTATATTTGCAATCATTCAATTTCCTGTTTATGTCATGGCTCGAAGTATCACCAAGAATCTATGGAAGCAACTTAAGAAGCTCTTTCCAACAAGATTGATTCAACACTGCATGAGTCATATTGGATGTTATTAG 2040 0.3941 MDEMQQKEGGELERVEETKLFCEEMKEAQKAAMKKQWEEFKKIMMEKPENILKQFDLFGNTAIHVATRSHTQLLSEFIEMVPAEERWNALCKKNVEGNTVLHEIVFSKHAQEMADVVFRFEEQLLTPQKNPLLELRNNEGESPLFVAAMHGKLKILKYMANRVQNLGEHFRLSDDKYNALHASVIGQHFHVAIWLERMDENLSLEKDGKDLTCLQLLSKMPQVFRSCIHMGPLKNTIYHLLPDEYDNDEHSQLFKKKDEENGKEDEPTLFKSAISEINYRFWKHLAKEFEGIDQTWKEKKKHKLAEHLASTLVTNDLSWQASKNKYNRTILITMPHDPINVVKRKRVSVRKREERRKKTEERPERTALFLATKNGIVEIVNKFLQVHPAAIYHVTEKQHNILTMVVKYRQRKILKLIERTGTIESLVAQITDKRRTVLHEVARMHYYKAEHLAGVAFHLQDELRWYDRVRRFTPKHYNMHCDIDGHTPEDMLEIEHDGMLKEAKKWLKETAQSCSTVAILVATVVFAAAYTIPGGTENGTPVFIHSSVFLFFTIMDVVALATSLASVVIFLSILTSPCDLWDFHKSLPRKLNLGFVLLFFSLLTTMFAFSATMLLTIRLEWKKWTLIYSATFFPATIFAIIQFPVYVMARSITKNLWKQLKKLFPTRLIQHCMSHIGCY* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0346 679 Gene3D - 2 223 IPR036770 -
Pvu10g0346 679 Gene3D - 256 461 IPR036770 -
Pvu10g0346 679 Pfam Domain of unknown function 504 614 IPR026961 -
Pvu10g0346 679 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 51 656 - -
Pvu10g0346 679 PANTHER CASKIN 51 656 - -
Pvu10g0346 679 SMART ANK_2a 175 204 IPR002110 GO:0005515
Pvu10g0346 679 SMART ANK_2a 363 393 IPR002110 GO:0005515
Pvu10g0346 679 SMART ANK_2a 58 89 IPR002110 GO:0005515
Pvu10g0346 679 SMART ANK_2a 139 168 IPR002110 GO:0005515
Pvu10g0346 679 SUPERFAMILY Ankyrin repeat 31 421 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0346 Pvu-Chr10 4884563 4888968 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0346 497 574 Miscellaneous Gene Families AT3G09550 39.759 4.39e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0346 - - gmx:100788731 896.73