Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0345 ATGGATGAAAAGCAGGTGAAGGAAGGAGGAGAGTTGGAGAGAATGGAAGAAACGAAACTGTTTTGTGAGGAAATGAAAGAAGCTCAAAAAGCAGCCATGGAGAAACAATGGAAAGAGTTCAAGAAAATAATGATGCAAAAGCCGGAGAACATTCTGAAGCAGTTTGATCTGTTTGGGAACACTGCGATCCATGTTGCAACTCGCTCCCACCCTCAACTCCTCTCAGAGTTGCTAGAAATGGTGCCTGATGAAGAAGAAAGGTGGAACGCTTTGTGCAGGAAGAATGTTGAGGGAAACACTGTCTTGCACGAGATTGTGTTTTCAAAAAAGGCCAAGAAAATGGTTGATGTGGTGTTCAGATTTGAAGATCAGTTGCTGACACCACAAAAGAAGCCATTGCTGGAGCTCACAAACAACCAAGGAGAAACCCCTTTGTTCGTCGCTGCCATGCATGGAAAGCTCAAGATTCTCAAGTATATGGCTAACCGTGTTCAGAATCTTGGAAAACATTTTCGTCGATCTGACAAATATAACGCTCTTCATGCGAGTGTCATTGGCCAACATTTTCATGTTGCAATTTGGCTGGAAAGAATGGATGAAAAACTTGCTCTGGAAAAGGATGAGAAGGACTTAACTTGTCTTCAACTACTCTCCAAAATGCCACAGGTTTTCCGAAGCCATACTCACATGGGACCATTGAAGAACACCATTTATCACTTGCTTCCTGATGGATATGATAATCATGAACAGTCACAATTGTTTAAACAAAAGAAGGATGAAGAAAATGGTAAAGAGGATGATGAGCCTACAATCTGCAAATCAGCCATTTCAGAGATCAACTACAGGTTTTGGAAACGCATGGCCAAAGAGTTTGAAGGAATTGACCAAATGTGGAAGGAAAAGAAAAAACATAAGTTGGCTGAACATCTAGCGAGCATTTTAGTAACATATGATTTATCATGGCAAGTATCAAAAAATGAGTATAATAGGACAATATTGATTACAATGCCACGTGATCCTTTAAACGTGGCCAAAAGAAGAAGAGTAAATGCACAAAAAAGGGAAGAGAGGCGTAAGAACACAGAAGAACGTCCAGAACGCACTGCACTCTTCTTAGCAACTAAAACTGGAATTGTAGAAATTGTTAATAAATTTCTTCAAGTGCATCCTGCAGCTATATATCATGTTACTGAGAATCAGCAAAACATATTGACCATGGCTGTTAAGTATCGACAAAAAAAAATTCTTAAACTGATAGAAAGAACAGGTACAATTGAATCATTGGTTGCTCAAATCACAGATAAAGGAAGAACTGTGTTGCATGAAGTTGCAAGAATGGATTACTACAAAGCAGAACACTTAGCTGGAGTGGCATTCCATCTACAAGATGAGTTGCGTTGGTATGATAGTGTGAGAAGATTCACTCCTAAACATTACAACATGCACTGTGACATAGATGGACACACACCAGAAGACATGTTAGAAATTGAGCATGATGGAATGCTTAAAGAGGCACAAAAATGGTTAAAGGAAACGGCTCAATCATGCTCCACTGTTGCTATTCTGGTTGCTACAGTTGTATTTGCTGCTGCATACACCATTCCAGGGGGAACTGAAAATGGTACTCCTGTATTCCTTCATTCAAGTGTGTTTCTCTTTTTCACCATCATGGATGTTGTGGCTCTTGCTACCTCACTTGCTTCAGTTGTTGTCTTCCTTTCCATCCTCACTTCCCCATGTGAGTTATGGGATTTTCATAAGTCTCTCCCTCGGAAACTAAATTTGGGATTTGCTTTGTTGTTCTTTTCTTTGATGACAACAATGCTTGCATTCAGTGCAACCATGTTGCTCACCATTCGATTGGAATGGAGGAATTGGACTTCAACATTGATATACAGTGCTGCTTTCTTTCCTGTCACTATATTTGCAATCATTCAATTTCCTGTTTATGTCATGGCTCGAAGTATCACCAAGCATCTATGGAAGCAACTCAAGAAGATTTTTCCAACAAGATTGATTCAACACTGCATGAGTCATACTTGA 2043 0.3979 MDEKQVKEGGELERMEETKLFCEEMKEAQKAAMEKQWKEFKKIMMQKPENILKQFDLFGNTAIHVATRSHPQLLSELLEMVPDEEERWNALCRKNVEGNTVLHEIVFSKKAKKMVDVVFRFEDQLLTPQKKPLLELTNNQGETPLFVAAMHGKLKILKYMANRVQNLGKHFRRSDKYNALHASVIGQHFHVAIWLERMDEKLALEKDEKDLTCLQLLSKMPQVFRSHTHMGPLKNTIYHLLPDGYDNHEQSQLFKQKKDEENGKEDDEPTICKSAISEINYRFWKRMAKEFEGIDQMWKEKKKHKLAEHLASILVTYDLSWQVSKNEYNRTILITMPRDPLNVAKRRRVNAQKREERRKNTEERPERTALFLATKTGIVEIVNKFLQVHPAAIYHVTENQQNILTMAVKYRQKKILKLIERTGTIESLVAQITDKGRTVLHEVARMDYYKAEHLAGVAFHLQDELRWYDSVRRFTPKHYNMHCDIDGHTPEDMLEIEHDGMLKEAQKWLKETAQSCSTVAILVATVVFAAAYTIPGGTENGTPVFLHSSVFLFFTIMDVVALATSLASVVVFLSILTSPCELWDFHKSLPRKLNLGFALLFFSLMTTMLAFSATMLLTIRLEWRNWTSTLIYSAAFFPVTIFAIIQFPVYVMARSITKHLWKQLKKIFPTRLIQHCMSHT* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0345 680 SMART ANK_2a 140 169 IPR002110 GO:0005515
Pvu10g0345 680 SMART ANK_2a 399 427 IPR002110 GO:0005515
Pvu10g0345 680 SMART ANK_2a 58 86 IPR002110 GO:0005515
Pvu10g0345 680 SMART ANK_2a 175 204 IPR002110 GO:0005515
Pvu10g0345 680 SMART ANK_2a 365 395 IPR002110 GO:0005515
Pvu10g0345 680 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 51 660 - -
Pvu10g0345 680 PANTHER CASKIN 51 660 - -
Pvu10g0345 680 Pfam Domain of unknown function 506 616 IPR026961 -
Pvu10g0345 680 SUPERFAMILY Ankyrin repeat 32 449 IPR036770 -
Pvu10g0345 680 Gene3D - 1 229 IPR036770 -
Pvu10g0345 680 Gene3D - 325 515 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0345 Pvu-Chr10 4865782 4873066 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0345 499 666 Miscellaneous Gene Families AT3G09550 28.324 2.32e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0345 - - gmx:100788731 985.326