LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu10g0344	ATGGCTTCTGCAAATCCAACACTCCCGTTAGCCTTCGCCCAGCGCCACCGTCACGGTGTTTCGCAGCGTCCACTTTTCTTCTTTGCTAAATTCCGTAACGGAGTTTCCCTCTCTGCTTCGGCTTCCAAACGGAGAGTGTTGGCGAAAGCGCAGAAGGCTGTGAACGAGGAAGTTGTTGAAAGCCAAAGCTCGGAGTTGAAGAATGGTACCCAACGCACTCCTTCTTCCTCCAAATTGGTGCTTGTTGTTGGTGGCTCCGGAGGCGTTGGGCAGCTGGTAGTTGCATCACTGATTCAGCAGAGTATTAAGTCACGGTTGATACTTAGGAATCCTGAGAAAGCCACAGAACTATTTGGTGAACAGGATAAGGAGAAACTGCAGGTATTCAAAGGTGACACAAGGAACCAGGAAGATTTGGATCCATCCTTATTTGAGGATGTCACACACGTGATTTGCTGCACAGGAACAACAGCATTTCCTTCAAGGCGTTGGGATGATGATAATACACCAGAAAGGGTTGATTGGGTGGGAGTAAAGAATCTAGTATCTGCATTGCCTTCCTCAGTGAAGAGAGTTGTTCTTGTGTCATCAATAGGTGTGACCAAATTCAATGAATTGCCATGGAGCATTATGAACCTATTTGGTGTCCTGAAGTATAAGAAGATGGGGGAGGATTTTCTGAGGAGTTCTGGCCTTCCATTTACCATAATCAGACCTGGAAGGTTGACAGATGGACCATACACATCATATGATCTTAATACTTTGCTCAAAGCAACAGCTGGCCAACGACGAGCAGTCCTTGTAGGTCAAGGTGATAAACTAGTTGGAGAAGCCAGCAGAATTGTGGTTGCTGAAGCTTGCGTGCAGGCACTAGATCTCGAAGTCACTGAAAACCAAGTATATGAAGTTAACTCTGTTGAGGGGGAAGGTCCTGGAAATGAAGCTAAGAAGTGGCAAGAATTATTTGAATCTGCACTGTCCAGCTAG	987	0.462	MASANPTLPLAFAQRHRHGVSQRPLFFFAKFRNGVSLSASASKRRVLAKAQKAVNEEVVESQSSELKNGTQRTPSSSKLVLVVGGSGGVGQLVVASLIQQSIKSRLILRNPEKATELFGEQDKEKLQVFKGDTRNQEDLDPSLFEDVTHVICCTGTTAFPSRRWDDDNTPERVDWVGVKNLVSALPSSVKRVVLVSSIGVTKFNELPWSIMNLFGVLKYKKMGEDFLRSSGLPFTIIRPGRLTDGPYTSYDLNTLLKATAGQRRAVLVGQGDKLVGEASRIVVAEACVQALDLEVTENQVYEVNSVEGEGPGNEAKKWQELFESALSS*	329

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu10g0344	328	Gene3D	-	76	327	-	-
	Pvu10g0344	328	PANTHER	NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN	65	325	-	-
	Pvu10g0344	328	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	76	304	IPR036291	-
	Pvu10g0344	328	PANTHER	NAD DEPENDENT EPIMERASE/DEHYDRATASE	65	325	-	-
	Pvu10g0344	328	CDD	SDR_a5	95	303	-	-
	Pvu10g0344	328	Pfam	NAD(P)H-binding	84	292	IPR016040	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu10g0344	Pvu-Chr10	4849961	4857055	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu10g0344	78	307	Miscellaneous Gene Families	AT1G09510	27.106	4.74e-06	45.8

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu10g0344	-		-	gmx:100804322	530.406