Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0340 ATGGTTGTCCGCTATTTGCCTTTGTGGAACATCATTGATGAAAGGTGGGACAAGCAACTCCATAGGCCTTTGCATGTTGCAGGCTATTTTCTTAACCCTCAAATGCATTATCGTCCTGGATTTAAAGCAGATTTGGAGGTGAAGCGTGGTCTAATGGAATGCATAACTAGGATGGTGGAGGATGAGGATGAACAAACTCTCATTGATGTTCAAATTGATGATTTCAAAAAACGAGCAAAAAATTTTGGTTGTCCCATGGATACTAGGTCAATCAATTTAAAGACTCCCGCAGATTGGTGGGAGTCTTATGGTGATGAGTATCCAGAACTCCAAAAGTTTGCCATTCATGTATTGAGCTTAACATGTAGCTCTTCCGGATGTGAGCGTAACTGGAGTTCCTTTGAGATGGTCCACACAAAGAGAAGAAATAGGCTAAAGCAAAGCACAATGAATGATGTTGTTTTTGTTATGGCTAATTCAAAATTAGCTAAGAAGAAGCAAACAAGAAAACCAACTCAAATTAATATTGATGATTGTTCATCCGATGACGAGTGGATTATGGAAGATGAGCATGAGCATAATGAAACATTTGATTTGGATGAAAACTTGGTTCCTATTGAAGTAGAGGAGGAAGAATCTTTACATAGTCATCACTTAGACATGATTGATTTGAATGATGAAGGAGATGAAAATCATGAAGTTGAATATGAATTTAACTTACAAGATTATTTGGTTTAG 738 0.3726 MVVRYLPLWNIIDERWDKQLHRPLHVAGYFLNPQMHYRPGFKADLEVKRGLMECITRMVEDEDEQTLIDVQIDDFKKRAKNFGCPMDTRSINLKTPADWWESYGDEYPELQKFAIHVLSLTCSSSGCERNWSSFEMVHTKRRNRLKQSTMNDVVFVMANSKLAKKKQTRKPTQINIDDCSSDDEWIMEDEHEHNETFDLDENLVPIEVEEEESLHSHHLDMIDLNDEGDENHEVEYEFNLQDYLV* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0340 245 PANTHER OSJNBA0013A04.12 PROTEIN 4 200 - -
Pvu10g0340 245 PANTHER HAT TRANSPOSON SUPERFAMILY 4 200 - -
Pvu10g0340 245 SUPERFAMILY Ribonuclease H-like 7 160 IPR012337 -
Pvu10g0340 245 Pfam hAT family C-terminal dimerisation region 95 156 IPR008906 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0340 Pvu-Chr10 4781886 4784027 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0340 - - vun:114194784 355.14