Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0328 ATGGAAGAATATTACTACAAGAGGCATCATGTGCCAGCATTTGGGAGCTGGGATTGGAATGATAATCTTCCCTTCACTCAGTGCTTTGAGTCTGCAAGACAAGCTGGTTTGTTAAGATATAGTTATTCTGAGTCTGAAGATAGAGACCTTTATGTCACTGGGGACTTGTATGAGAATGATGTTGTCACACCTGCTATGATCGTTGTTCCTCGTAGAAGGGAAAAGGGACGTTGCCAGCATGAAAAAGAAGCAAAAAAGCAGAATTGGGTGAGTAATGTGAAGGAGCTACCTAGCCCAACTAGTCCAATTGCAAGACCAAAACCAAAACCTGTGGATGAAGACTTGTACAAGATCTCACCAGAGCTACTTTATGCCAAAACTAGGAAGAAGAGAGGACTGTGTTTCTTTCCAAGCTGTTTGATACCAACATGCATTGCCTGA 441 0.424 MEEYYYKRHHVPAFGSWDWNDNLPFTQCFESARQAGLLRYSYSESEDRDLYVTGDLYENDVVTPAMIVVPRRREKGRCQHEKEAKKQNWVSNVKELPSPTSPIARPKPKPVDEDLYKISPELLYAKTRKKRGLCFFPSCLIPTCIA* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0328 146 PANTHER EXPRESSED PROTEIN 1 145 - -
Pvu10g0328 146 PANTHER PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR AVRRPT-CLEAVAGE: CLEAVAGE SITE PROTEIN-RELATED 1 145 - -
Pvu10g0328 146 MobiDBLite consensus disorder prediction 80 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0328 Pvu-Chr10 4592006 4595055 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0328 - - gmx:100306260 296.975