Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0322 ATGGATGTGAAAACAAAAAGGAGAGTTGATGTAGAGAATGGTGATGAAGGAGAAGACTTGGTTCTGGCAACTCTGGTTGCCAATGGAGATGACATTAGTCCTCTTGTGAGGCATGCCTTCGAAATGGGGCGCCCCATGGGGCTCCTACGCCAACTGGATTTTGTGGTGAAGAAAAAGGAAGCTGAAATTGAGGCAATGTGCAAGACTCACTATGAGGAATTCATCCTTGCAGTTGATGAACTTCGTGGTGTGTTAGTTGATGCTGAAGAGCTCAAGAGTGAACTCCAAAGTGACAATTTCAAGTTGCAGCAGGTTGGCAGCACCCTTCTTGTGAAGCTTGAGGAGCTTTTTGTATCATATACAGTGAAGAAGAATGTGACTGAAGCTATAAAAATGTCAAAGAACTGTATGAAAGTGCTGGAGTTGTGTGTGAAGTGCAACAATCATATTTCTGAAGGCGAGTTTTATCCTGCATTGAAAACTGTTGATTTGCTTGAGAAGAATTACATAGAGAATATTCCTGCCAAGGCTCTCAAAAAGGTGATAGAGAAAAGAATTCCTTCCATAAAGTCACACATCGAGAAGAAAGTATGCAGCCAAGTTAATGAATGGATGGTACAAATTCGAAGTTCTTGTAAAATAATTGGGCAAACGGCAATTGGTCGTGCTGCATCGAATCGCCAGAGGGATGAGGAAATGCTGGAAAGGAAGAGAAGGTCTGAAGGATTGAATATTTCAGTAGTTGGTGATCAAACTTACAATTTGGTGGTTGAAGAAGATGAAGATTCTGCCATGAAATTTGATCTCACACCCCTCTATCGTGCTTGTCATATTCATAGTTGCCTTGGGATCCTAGAGCAGTTTCATGAATATTACTACAAGAATAGATTGTTACAACTGAATTCGGATTTGGAGATATCTTCAATGCAACCCTTTATTGAGTATTATCAGACATTTTTGGCTCAAATTGCTGGGTATTTCATAGTGGAAGATAGGGTCCTGAGGACTGGTGGTGGGCTTCTAGAGCCTGATCAGGTTGAAACTATGTGGGAAACTGCTTTAGCAAAAGTAACATCAATGTTAGAGGTGCAATTCTCCCATATGAAATCTGCCACGCATCTTCTCCTGGTTAAGGATTATGTTACACTTCTTGGGTCTACTCTTAGACAATATGGATATGACATTGGCCAACTTCTTGATGTGCTTGATAATAGCCGTGACAAATACCATATTCTTCTTTTGGAAGAATGTCGGAAGCAAATCGTTGAGATTCTTGGCAGTGACACATATGAGCAGATGGTGATAAAAAAGGATTCTGATTATGAGAATAATGTTCTGTCATATAATCTTCAAACATCAGATATTATGCCTGCTTTTCCATATGTTGCATCATTCTCCTCCATGGTACCTGATGCTTGTCGCATTGTGAGATCCTTCATCAAAGGCTCTGTTGATTACTTATCTTATGGTCCACGTAGCGGTTTCTTTGATATTGTGAGGAAGTATTTGGACAAGCTCCTGATTGAAGTATTGAATGAATCTTTGCTTGACATCATCAATAGTGCAAGTATCTCTGTGTCTCAGGCCATGCAGCTTGCTGCAAACATAACTGTTCTTGAAAGAGCTTGTGATTTTTTCCTTCGACATGCAGCTCATCAGTGTTGCATACCCGTTCGAACAGCTGAGAAGCCCCAATCTAATTTGACTGCAAAGGTATTACTGAAAACTTCGAGGGATGCAGCTTATATTACTCTGCTGAGTTTGGTCAACACAAAGTTAGGTGAGTATATGAATCTTATAGAATGTATCAACTGGACTACAGAGGAGACAAAGACAAGTGGAAATGACTACATAAATGAAGTGATATTTTACCTAGATTCACTTATGTCCACAGCACAACAGATTTTACCCCTAGATGCTATGTACATGGTTGGGACCAGTGCACTTGAGCATATTTCCAACACAATTGTGGGAGCTTTCCTTAGTGATAATATCAAAAGGTTTAATGCAAATGCAGTTATGAATATCAACAATGATGTTAAAATGTTGGAGAATTTTGCAGATGACCGGTTTTATTCTTCCGGTCTGTGTGAAACTTATGCAGGAGGTGGTTTTAAGAGCTGTCTGATAGAAGCACGACAGTTAATCAATCTTCTGTCAAGTAGTCAGCCTGAGAACTTCATGAATCCTGTTATAAGGGAGAAAAATTACTATGCACTGGATTATAAGAGGGTAGCATCCATTTGTGAAAAATTCAAGGATTCTGCAGATGGAATCTTTGGAAGTCTTTCAAATAAAAACACAAAGCAAACTGCTAAAAAGAAATCAATGGACATGCTCAAAAAGCGACTAAAGGATTTCAATTGA 2367 0.3946 MDVKTKRRVDVENGDEGEDLVLATLVANGDDISPLVRHAFEMGRPMGLLRQLDFVVKKKEAEIEAMCKTHYEEFILAVDELRGVLVDAEELKSELQSDNFKLQQVGSTLLVKLEELFVSYTVKKNVTEAIKMSKNCMKVLELCVKCNNHISEGEFYPALKTVDLLEKNYIENIPAKALKKVIEKRIPSIKSHIEKKVCSQVNEWMVQIRSSCKIIGQTAIGRAASNRQRDEEMLERKRRSEGLNISVVGDQTYNLVVEEDEDSAMKFDLTPLYRACHIHSCLGILEQFHEYYYKNRLLQLNSDLEISSMQPFIEYYQTFLAQIAGYFIVEDRVLRTGGGLLEPDQVETMWETALAKVTSMLEVQFSHMKSATHLLLVKDYVTLLGSTLRQYGYDIGQLLDVLDNSRDKYHILLLEECRKQIVEILGSDTYEQMVIKKDSDYENNVLSYNLQTSDIMPAFPYVASFSSMVPDACRIVRSFIKGSVDYLSYGPRSGFFDIVRKYLDKLLIEVLNESLLDIINSASISVSQAMQLAANITVLERACDFFLRHAAHQCCIPVRTAEKPQSNLTAKVLLKTSRDAAYITLLSLVNTKLGEYMNLIECINWTTEETKTSGNDYINEVIFYLDSLMSTAQQILPLDAMYMVGTSALEHISNTIVGAFLSDNIKRFNANAVMNINNDVKMLENFADDRFYSSGLCETYAGGGFKSCLIEARQLINLLSSSQPENFMNPVIREKNYYALDYKRVASICEKFKDSADGIFGSLSNKNTKQTAKKKSMDMLKKRLKDFN* 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0322 788 PANTHER EXOCYST COMPLEX COMPONENT 1 788 - -
Pvu10g0322 788 PIRSF Sec15 1 788 IPR007225 GO:0006886|GO:0090522
Pvu10g0322 788 Coils Coil 78 98 - -
Pvu10g0322 788 Gene3D - 395 565 IPR042045 -
Pvu10g0322 788 PANTHER SEC15 1 788 IPR007225 GO:0006886|GO:0090522
Pvu10g0322 788 Pfam Exocyst complex subunit Sec15-like 441 752 IPR046361 -
Pvu10g0322 788 Gene3D Dsl1p vesicle tethering complex, Tip20p subunit, domain D 577 727 IPR042044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0322 Pvu-Chr10 4499041 4501909 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0322 K19985 - gmx:100796988 1394.41