Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0318 ATGGCAAGAGGTTTGATTGGAACTGGATCTTTGAGAGGAAAAAACTATCCAGGAAGGCTCACATTTAGGGTTTTCATAACATGTTTGGTTGCAGGATTTGGAGGTTTGATCTTTGGTTACGATCTTGGCATATCAGGTGGTGTGACTTCTATGGATCCTTTTCTGAAGAAGTTCTTCCCCACAGTCTATGAAAAGGAGAACAACATGAAGTCGTCGGACAGCCAGTACTGCAAATTTGACAGTCAAACATTGACGTTGTTCACATCATCTCTGTATTTGGCTGCTCTTGTTGCATCTCTTTTTGCATCTAGTGTCTCTCGAAGATTCGGAAGACGTCTCAGCATGCTCTCCGGAGGTGTGCTCTTTCTTGCTGGTGCTGGACTGAATGCCTTCTCTCAACACGTTTCGATGCTCATTGTTGGTCGCATTTTACTTGGCTTTGGAATTGGATTCGCTAATCAGTCTGTGCCAATCTATGTTTCTGAGGTTGCTCCCTGTAAGTTTCGAGGAGCTCTTAACATGATGTTCCAACTAGCAATCACCCTTGGCATATTCATTGCCAATGTTCTCAACTACGTATTTGCAAAAATGGAGAACGGAGAAGGTTGGCGCTACAGTTTGGGCTTTGTTGCAGTCCCTGCCACCATGATCATCATTGGTGCAATCTTTCTTCCAGATTCACCAAGTTCTTTGATCGAACGTGGTCTGAACGAGGATGCCAAGAAGGAACTCATTAATATTCGAGGAAGCAGTGACATTGAAGAGGAGTTTCAGGATCTTGTGGCAGCTAGTGAATCCTCTAAGGCAGTGAAACACCCTTGGGTTTCTTTGCTAAAGAGGCAATACAGACCTCAACTCACGTTTGCGGTGTTCATTCCCTTATTCCAACAACTCACTGGCATGAATGTGATAGTATTTTATGCTCCTGTTTTGTTTAAAACTATTGGTTTTGGAGCAAATGTTGCTCTCATGTCTGCCATGATCATCGGGGGTTGCAATGCAATTGCCACTCTTGTCTCCATACTAACTGTTGACAAGTTTGGAAGACGCACTCTTTTCTTAGAAGGAGGTGCACAAATGTTTATCTGTCAGATTGTGATTACTGTGGCAATTGCATGCAAATTTGGACTTGATGGAAACCCGGGAGTGTTGCCAAAATGGTATGCTATCGTGGTTGTGTGTGGCATATGCGTGTACGTGGCAGGATTTGCATGGTCTTGGGGTCCTTTGGGATGGTTGGTTCCAAGTGAGATTTTCCCACTTGAAGTGCGATCAGCTGCTCAAAGTATCAATGTCTCTGTTAACATGATCTTCACCTTTGCCATTGCGCAAATCTTCTCCTCTATGCTCTGTCACATGAAGTTTGGACTCTTCATTTTCTTTGCATGTTTTGTCGTGCTCATGACTATATTCATCTTCAAGCTTCTCCCAGAGACCAAAGGGGTTCCCATTGAAGACATGCAT 1464 0.4372 MARGLIGTGSLRGKNYPGRLTFRVFITCLVAGFGGLIFGYDLGISGGVTSMDPFLKKFFPTVYEKENNMKSSDSQYCKFDSQTLTLFTSSLYLAALVASLFASSVSRRFGRRLSMLSGGVLFLAGAGLNAFSQHVSMLIVGRILLGFGIGFANQSVPIYVSEVAPCKFRGALNMMFQLAITLGIFIANVLNYVFAKMENGEGWRYSLGFVAVPATMIIIGAIFLPDSPSSLIERGLNEDAKKELINIRGSSDIEEEFQDLVAASESSKAVKHPWVSLLKRQYRPQLTFAVFIPLFQQLTGMNVIVFYAPVLFKTIGFGANVALMSAMIIGGCNAIATLVSILTVDKFGRRTLFLEGGAQMFICQIVITVAIACKFGLDGNPGVLPKWYAIVVVCGICVYVAGFAWSWGPLGWLVPSEIFPLEVRSAAQSINVSVNMIFTFAIAQIFSSMLCHMKFGLFIFFACFVVLMTIFIFKLLPETKGVPIEDMH 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0318 488 SUPERFAMILY MFS general substrate transporter 20 487 IPR036259 -
Pvu10g0318 488 ProSitePatterns Sugar transport proteins signature 1. 340 357 IPR005829 GO:0016021|GO:0022857|GO:0055085
Pvu10g0318 488 PANTHER MAJOR FACILITATOR, SUGAR TRANSPORTER, MAJOR FACILITATOR SUPERFAMILY-RELATED 4 488 - -
Pvu10g0318 488 ProSitePatterns Sugar transport proteins signature 2. 144 169 IPR005829 GO:0016021|GO:0022857|GO:0055085
Pvu10g0318 488 Pfam Sugar (and other) transporter 28 487 IPR005828 GO:0016021|GO:0022857|GO:0055085
Pvu10g0318 488 TIGRFAM SP: MFS transporter, sugar porter (SP) family 17 486 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu10g0318 488 CDD MFS_STP 30 478 IPR044778 GO:0015145|GO:0015749
Pvu10g0318 488 Gene3D MFS general substrate transporter like domains 18 488 IPR036259 -
Pvu10g0318 488 PRINTS Sugar transporter signature 35 45 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu10g0318 488 PRINTS Sugar transporter signature 139 158 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu10g0318 488 PRINTS Sugar transporter signature 296 306 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu10g0318 488 PRINTS Sugar transporter signature 393 414 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu10g0318 488 PRINTS Sugar transporter signature 416 428 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu10g0318 488 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 4 488 IPR045262 GO:0015144
Pvu10g0318 488 ProSiteProfiles Major facilitator superfamily (MFS) profile. 27 480 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0318 Pvu-Chr10 4419303 4420849 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0318 14 487 Organic Solute Cotransporters AT1G11260 67.932 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0318 K24193 - gmx:102662083 759.214