Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0315 ATGGCAGGAGGTGTGATCGGAACTGGGTCTACGAGAGGAAAGAACTATTCAGGAAGACTCACATTCAGGGTCTTCATAACATGTTTGGTAGCATCATTTGGAGGTCTGATCTTCGGTTACGATCTTGGCATATCAGGTGGTGTGACTTCTATGGATCCTTTTCTGAAGAAGTTCTTCCCTGTAGTGTATGAAAAGGAGAACAACATGAAGCCTTCTGATAGCCAGTACTGCAAATTTGACAGCCAAACATTGACGTTGTTCACATCGTCTCTATATTTGGCTGCTCTTGTTGCATCACTCTTTGCATCTAGTGTCTCTCGAATCTTCGGAAGGCGTCTCAGTATGATCTCTGGGGGTGTGCTCTTTCTTGCCGGTGCTGGACTAAATGCCTTTGCTCAACACGTTTGGATGCTCATTGTTGGTCGCATTTTTCTTGGCTTTGGAATTGGATTCGCCAATCAGTCTGTGCCAATTTATATGTCTGAGGTTGCTCCCTATAAGTTTCGAGGAGCTCTTAACATGATGTTCCAGCTAGCAATCACCATTGGCATTTTCGTGGCCAATGTTCTCAACTACATATTTTCCAAAATGGAGAATGGAGAAGGTTGGCGCTACATTTTGGGCTTTGCTGCAGTCCCTGCCATCATGATCATCATTGGTGCATTCTTTCTTCCAGATTCACCAAGTTCTTTAATCGAACGTGGTCTGGTCGAGGAGGCCAAGAAGGAACTCATCAAGATTCGAGGAAGTAATGACATTGAGGAGGAGTTTCAAGATCTTGTGGCAGCAAGGGAATCCTCCAAGGCTGTGAAACATCCTTGGGCTTCTTTGCTAAAGAGGCAATACAGGCCTCAACTCACATTTGCGGTGTTCATTCCATTTTTCCAACAACTCACTGGCATGAATATGATAGTGTTTTATGCTCCTGTTTTGTTTAAAACCATTGGTTTTGGAGCAAATGCTGCTCTCATGTCTGCCATGATCACTGGGGGTTGCAATGCAATTGCCACTCTTGTCTCCATACTAATTGTTGACAAGTTTGGAAGACGCACTCTTTTTTTAGAAGGAGGATGGTTGGTTCCAAGTGAGATTTTCTCACTTGAAGTACGATCAGCTGCTCAAAGTGTAAATGTCTCTGTCAATATGATCTTCACGTTTGCCATTGCCCAGATCTTCACCTCCATGCTCTGTCACATGAAGTTTGGACTCTTCATTTTCTTTGCATGCTTTGTCGTTCTCATGACCCTATTTATCTTCAAGCTTCTCCCAGAGACCAAGGGGGTTCCTATTGAAGACATGCATGTTGTTTGGCAGACTCACCCTTACTGGAAAAACTTTGTCCAACCACCTCATGTTCCAACTATTGGCACCATTGTTTAA 1380 0.4377 MAGGVIGTGSTRGKNYSGRLTFRVFITCLVASFGGLIFGYDLGISGGVTSMDPFLKKFFPVVYEKENNMKPSDSQYCKFDSQTLTLFTSSLYLAALVASLFASSVSRIFGRRLSMISGGVLFLAGAGLNAFAQHVWMLIVGRIFLGFGIGFANQSVPIYMSEVAPYKFRGALNMMFQLAITIGIFVANVLNYIFSKMENGEGWRYILGFAAVPAIMIIIGAFFLPDSPSSLIERGLVEEAKKELIKIRGSNDIEEEFQDLVAARESSKAVKHPWASLLKRQYRPQLTFAVFIPFFQQLTGMNMIVFYAPVLFKTIGFGANAALMSAMITGGCNAIATLVSILIVDKFGRRTLFLEGGWLVPSEIFSLEVRSAAQSVNVSVNMIFTFAIAQIFTSMLCHMKFGLFIFFACFVVLMTLFIFKLLPETKGVPIEDMHVVWQTHPYWKNFVQPPHVPTIGTIV* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0315 459 TIGRFAM SP: MFS transporter, sugar porter (SP) family 18 356 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu10g0315 459 ProSitePatterns Sugar transport proteins signature 1. 340 357 IPR005829 GO:0016021|GO:0022857|GO:0055085
Pvu10g0315 459 SUPERFAMILY MFS general substrate transporter 21 433 IPR036259 -
Pvu10g0315 459 ProSitePatterns Sugar transport proteins signature 2. 144 169 IPR005829 GO:0016021|GO:0022857|GO:0055085
Pvu10g0315 459 CDD MFS_STP 30 424 IPR044778 GO:0015145|GO:0015749
Pvu10g0315 459 Gene3D MFS general substrate transporter like domains 17 356 IPR036259 -
Pvu10g0315 459 Gene3D MFS general substrate transporter like domains 357 440 IPR036259 -
Pvu10g0315 459 ProSiteProfiles Major facilitator superfamily (MFS) profile. 27 459 IPR020846 GO:0022857
Pvu10g0315 459 PANTHER MAJOR FACILITATOR, SUGAR TRANSPORTER, MAJOR FACILITATOR SUPERFAMILY-RELATED 2 357 - -
Pvu10g0315 459 PANTHER MAJOR FACILITATOR, SUGAR TRANSPORTER, MAJOR FACILITATOR SUPERFAMILY-RELATED 357 450 - -
Pvu10g0315 459 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 2 357 IPR045262 GO:0015144
Pvu10g0315 459 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 357 450 IPR045262 GO:0015144
Pvu10g0315 459 PRINTS Sugar transporter signature 35 45 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu10g0315 459 PRINTS Sugar transporter signature 139 158 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu10g0315 459 PRINTS Sugar transporter signature 296 306 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu10g0315 459 Pfam Sugar (and other) transporter 358 437 IPR005828 GO:0016021|GO:0022857|GO:0055085
Pvu10g0315 459 Pfam Sugar (and other) transporter 28 357 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0315 Pvu-Chr10 4396430 4398061 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0315 2 448 Organic Solute Cotransporters AT1G11260 58.167 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0315 K24193 - jre:108999507 600.127