Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0274 ATGAAGTCAACGGCGTCTTCATCTAGCTACACCCACTGGATCCATGACGTGTTCTTGAATTTCAGAGGAGACGACACGCGCGAGACTATCGTGTCACATCTCTACGCCGCACTCTCGAATGCGGGGATCAACACTTTCATCGACGATAACATTTTGAAGGGAACGGTGTTGGGGGCAGAACTGGTGCGAACCATACAAGGCTCTCAGATATCCATCATCGTTTTCTCCGAAAACTATGCTTCTTCTAATTGGTGTCTTAACGAACTGGTAGAAATCATGGAGTCTCGCATAGCTTACGGCCAGAAGGCGGTGCCCTTGTTTTACCATGTTGATCCGTCGCATGTTCGTAATCAGGAGGGTGGTTTTGGACAACAGTTGGAAGCACTTGCACAAAATTGTTTACCTCAAGGGTTGAACGATGAGGTGTTAATGATATGGAAAAATTCACTCTGGGAGGCTGCAAATCTTGCTGGTTGGCATGCAGTGAATTTCAGGACTTGGCTACGGGGAGGATGA 516 0.4748 MKSTASSSSYTHWIHDVFLNFRGDDTRETIVSHLYAALSNAGINTFIDDNILKGTVLGAELVRTIQGSQISIIVFSENYASSNWCLNELVEIMESRIAYGQKAVPLFYHVDPSHVRNQEGGFGQQLEALAQNCLPQGLNDEVLMIWKNSLWEAANLAGWHAVNFRTWLRGG* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0274 171 PANTHER TOLL-INTERLEUKIN-RESISTANCE (TIR) DOMAIN FAMILY PROTEIN 6 163 - -
Pvu10g0274 171 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 159 IPR035897 -
Pvu10g0274 171 SMART till_3 14 156 IPR000157 GO:0007165
Pvu10g0274 171 Gene3D - 9 167 IPR035897 -
Pvu10g0274 171 PANTHER TMV RESISTANCE PROTEIN N-LIKE 6 163 - -
Pvu10g0274 171 Pfam TIR domain 15 132 IPR000157 GO:0007165
Pvu10g0274 171 ProSiteProfiles TIR domain profile. 13 171 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0274 Pvu-Chr10 3892972 3895290 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0274 17 159 Miscellaneous Gene Families AT4G19920 34.965 3.60e-24 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0274 - - pvu:PHAVU_010G026300g 352.829