Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0258 ATGTCTCGCGCTCCCAACTACGAGTTCCAGGAATGGTGGAACAAGCAGCGTGAGAAGACCAACAACGTCGATCCCCTCAACGACCCCAAGCTCGACCATTCCCACTCCACCACTCCTCCGCCCTTCACCGCCCTCGACGTTGACTCCTCCTCCTCCTCCGTCGCCGCCAAAAAAGAACGCTCCCGGAGCGCCCGCCAGCTCTCCTGGGTATGCCTTCTCAAATTCCAGCAGCTCGCCGCGTCGCTCGGCTGGCTCTCCGGCGGCATCTTCCACCTCGCCCGCACCGCGCACCGCCGGATCGTGGACTCGGCGTCGCTGCGCGGCGACACGTCGCGGCTCTACCGCGCGATCCGCGTGTTCCTCGTGGTGGTCATCGTGCTCTTGGGATTCGAGCTCGTGGCGTATTTCAAGGGGTGGCATTTCAGGCGCCCTGATCCCAGCGACGTTCTGGGCTTGCTCGCCGTCGTTTACGCCACGTGGGTCGACGTCCGCGCCAGGTACATGTCGCCGCCGTTGCAGAGCCTGGCGAATTTGTGCACTGTTTTGTTCATCGTGCAGTCGGTGGACAGGGTCGTTTTGATCTTGGGGTGCTTCTGGATCAAGTTTCGGAGGCTCAAGCCTTTGGCCAGTGTGGATTACGATGTTGGGGATCATAGCGTGGAGGATTTTCCCATGGTGTTGGTTCAGATTCCCATGTGCAATGAGAGGGAGGTTTACCAGCAATCCATTGGAGCAGTTTGTATCATGGATTGGCCAAAGGAGAGAATGCTTGTTCAGGTTCTTGATGATTCTGATGAAGTAGATACCCAACAGCTTATCAAGGCAGAAGTTCATAAATGGCAGCAAAGGGGTGTTAGGATAATATATAGGCACCGGCTTATACGTACAGGCTACAAGGCAGGGAATCTGAAATCAGCAATGGGCTGTGATTATGTTAAGGATTACGAATTTGTGGCAATATTTGATGCTGATTTTCAGCCAACACCGGATTTCTTAAAGAAAACAGTGCCTTATTTCAAGGCAAAGGATGATTTGGCATTAGTCCAGGCAAGATGGGCATTTGTAAACAAGGATGAGAACTTGCTTACAAGATTGCAGAACATCAATTTGTCTTTCCACTTTGAGGTAGAACAACAGGTGAATGGTATCTTCCTTAACTTCTTTGGTTTTAATGGAACTGCTGGTGTGTGGAGAATAAAGGCCCTTGAGGAAAGTGGTGGTTGGTTGGAACGAACGACTGTGGAGGATATGGATATTGCTGTTCGTGCTCATCTCCATGGTTGGAAGTTTATATTCCTCAACGATGTTAAGTGTCTTTGTGAACTTCCAGAGACCTATGAGGCATATAAGAAACAACAACACCGCTGGCATTCGGGTCCAATGCAATTGTTTCGCTTGTGTTTTTTTGATATACTTCGTTCAAAGGTTAGTTGGGCAAAGAAGGTCAATTTGATATTTCTTTTCTTCCTCCTGAGGAAGCTTATCCTGCCATTTTATTCATTCACCCTATTCTGCATCATTCTTCCTTTGACCATGTTCCTTCCCGAAGCTGAGCTCCCAGCATGGGTTGTTTGTTACATTCCTGGTGTAATGTCCCTCTTAAGTGTGCTCCCAGCTCCACGTTCATTTCCATTTTTAGTTCCTTACCTTCTATTTGAGAACACTATGTCAGTAACTAAGTTTAATGCCATGATCTCTGGATTATTTCGCCTTGGAAGTTCCTACGAGTGGGTGGTTACAAAAAAGTTGGGAAGATCATCAGAGACAGATTTGGTTGCCTTTGAGAAAGAATCTGAACCTCTAATGCGATCTACTAGTCTCCATAGATCAAACTCAGATTCAGGCATTGAGGAACTAAGCAAACTAGAATTGTCAAAGAAAACTGGGAAGACCAAGAGAAATCGTCTCTTCAGGAAAGAACTTTATCTTGCATTCATTTTGTTGACTGCCTCAGTTAGAAGCTTACTATCTGCCCAAGGAATTCACTTCTACTTCCTCTTGTTTCAAGGGATAAGTTTTCTGGTTGTTGGTCTTGATTTGATTGGAGAGCAGGTAAGTTGA 2061 0.4779 MSRAPNYEFQEWWNKQREKTNNVDPLNDPKLDHSHSTTPPPFTALDVDSSSSSVAAKKERSRSARQLSWVCLLKFQQLAASLGWLSGGIFHLARTAHRRIVDSASLRGDTSRLYRAIRVFLVVVIVLLGFELVAYFKGWHFRRPDPSDVLGLLAVVYATWVDVRARYMSPPLQSLANLCTVLFIVQSVDRVVLILGCFWIKFRRLKPLASVDYDVGDHSVEDFPMVLVQIPMCNEREVYQQSIGAVCIMDWPKERMLVQVLDDSDEVDTQQLIKAEVHKWQQRGVRIIYRHRLIRTGYKAGNLKSAMGCDYVKDYEFVAIFDADFQPTPDFLKKTVPYFKAKDDLALVQARWAFVNKDENLLTRLQNINLSFHFEVEQQVNGIFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVKCLCELPETYEAYKKQQHRWHSGPMQLFRLCFFDILRSKVSWAKKVNLIFLFFLLRKLILPFYSFTLFCIILPLTMFLPEAELPAWVVCYIPGVMSLLSVLPAPRSFPFLVPYLLFENTMSVTKFNAMISGLFRLGSSYEWVVTKKLGRSSETDLVAFEKESEPLMRSTSLHRSNSDSGIEELSKLELSKKTGKTKRNRLFRKELYLAFILLTASVRSLLSAQGIHFYFLLFQGISFLVVGLDLIGEQVS* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0258 686 Pfam Glycosyl transferase family group 2 318 514 IPR001173 -
Pvu10g0258 686 PANTHER - 35 685 - -
Pvu10g0258 686 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 217 442 IPR029044 -
Pvu10g0258 686 MobiDBLite consensus disorder prediction 18 50 - -
Pvu10g0258 686 MobiDBLite consensus disorder prediction 32 50 - -
Pvu10g0258 686 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 6-RELATED 35 685 - -
Pvu10g0258 686 SUPERFAMILY Nucleotide-diphospho-sugar transferases 226 502 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0258 Pvu-Chr10 3599858 3608266 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0258 1 686 Miscellaneous Gene Families AT3G07330 72.110 0.0 1021
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0258 - - gmx:100801779 1217.99