Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0249 ATGGCCATGGCAGTGATTTCTCTGTTCATCTTGTTTTTTATCTCATTCTCCATATCCAGAGGAGAAATATCAGGGGAAGTGGGAGTGAACTATGGGCAATTGGGGAGCAACCTTCCACCGGCGAGAACCTCGGTGCGTCTGATACAGTCGCTGAAAGCGAAGCGCGTGAAGATCTACGACGCAAACGCGGAAATTCTGGAAGCGCTTCGGAACACGGGAATTGAGGTGTCGATTATGCTTCCCAACGAGCTTGTGGTGAACGCGTCCACCAACCAGACATTCTCGGACCAATGGGTTGGTTCCAACGTCGTACCCTTCTACCCACAAACGCTCATCCGGTACCTCCTCGTCGGCAACGAACTCATTAGCAGCACAG 376 0.5186 MAMAVISLFILFFISFSISRGEISGEVGVNYGQLGSNLPPARTSVRLIQSLKAKRVKIYDANAEILEALRNTGIEVSIMLPNELVVNASTNQTFSDQWVGSNVVPFYPQTLIRYLLVGNELISST 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0249 125 SUPERFAMILY (Trans)glycosidases 27 122 IPR017853 -
Pvu10g0249 125 Pfam Glycosyl hydrolases family 17 27 125 IPR000490 GO:0004553|GO:0005975
Pvu10g0249 125 Gene3D Glycosidases 25 125 - -
Pvu10g0249 125 PANTHER BNAC03G35190D PROTEIN 13 125 - -
Pvu10g0249 125 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 13 125 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0249 Pvu-Chr10 3505236 3505911 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0249 22 123 Glycoside Hydrolase AT4G14080 46.078 5.41e-30 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0249 - - pvu:PHAVU_010G0238000 231.106