Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0248 AACGAAACATGGGCCCACATTGTTCCCGCGATGCACCGAATCTCACACTCTCTGAAAGTCTTCGGTTTGCACAAGGTTAAAATCGGAACTCCACACGCAATGGACGTTTTGCAATCGTCGTTTCCACCATCAAACGGCACTTTCAGAAACGACATAGCGTTTCATATCATGAAGCCCATGTTACACTTTCTCCACAAAACACGGTCCTTTTTCTTTCTAGACGTGTACCCGTTTTTCGCGTGGGCCTCCGACCCGGCCCAAATTAACCTCAGTTACACTCTCTTCGAGTCCAGAAACATCACGGTAACGGACCCGTTAACGGGGTCAATCTACACCAACCTATTCGACCAGATGGTTGACGCCGTTTATTTCGCGATGAAACGGCTCGGATACCCGGGTATTCGGATCTTTATCGCTGAAACGGGTTGGCCCAATGGGGGAGACTTGGACCAAGTTGGCGCCAACGTTCACAATGCTGCCACGTATAACAGAAACATAGTGAAGAGGCTTACAAGAAACCCGGTTTTGGGAACCCCGGCTCGACCGGGTTCGGTTCTTCCGGCTTTTATATTTTCACTTTATAATGAGAACTTAAAGCCGGGTTTAGGTTCGGAGCGGCATTTCGGGTTGTTGTACCCGAACGGGTCGAGGGTTTACGACATTGATCTCTCCGGCAATACTCCGGAATCGGAGCTCGCACCGGTGCCGCCGGCGATGGACTATAAAGGGAAGGCGTGGTGCGTGGTGGCAGAGGGGGCGAATGTGACGGAGGTGGCGGCGGCGTTATCTTACTCGTGCTCGCAGGGAAACGGAACGTGTGACCCGATCCAACCTGGGCACCCGTGTTTTAAACCCGACTCGGTGACGAGTCATGCCGATTACGCTTTCAGTGCTTATTGGGCGCAGTTTAGGCGCGTGGGAGGAACGTGCTATTTCAATGGGCTTGCAACGCAAACTGCAAAGGATCCAAGTTATGGTTCTTGCAAGTTTCCAAGTGTGACACTTTGA 1008 0.5169 NETWAHIVPAMHRISHSLKVFGLHKVKIGTPHAMDVLQSSFPPSNGTFRNDIAFHIMKPMLHFLHKTRSFFFLDVYPFFAWASDPAQINLSYTLFESRNITVTDPLTGSIYTNLFDQMVDAVYFAMKRLGYPGIRIFIAETGWPNGGDLDQVGANVHNAATYNRNIVKRLTRNPVLGTPARPGSVLPAFIFSLYNENLKPGLGSERHFGLLYPNGSRVYDIDLSGNTPESELAPVPPAMDYKGKAWCVVAEGANVTEVAAALSYSCSQGNGTCDPIQPGHPCFKPDSVTSHADYAFSAYWAQFRRVGGTCYFNGLATQTAKDPSYGSCKFPSVTL* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0248 335 PANTHER BNAC03G35190D PROTEIN 5 327 - -
Pvu10g0248 335 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 5 327 IPR044965 GO:0004553|GO:0005975
Pvu10g0248 335 SUPERFAMILY (Trans)glycosidases 3 222 IPR017853 -
Pvu10g0248 335 Pfam X8 domain 246 317 IPR012946 -
Pvu10g0248 335 Pfam Glycosyl hydrolases family 17 6 222 IPR000490 GO:0004553|GO:0005975
Pvu10g0248 335 SMART X8_cls 245 330 IPR012946 -
Pvu10g0248 335 Gene3D - 239 333 - -
Pvu10g0248 335 ProSitePatterns Glycosyl hydrolases family 17 signature. 134 147 IPR000490 GO:0004553|GO:0005975
Pvu10g0248 335 Gene3D Glycosidases 1 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0248 Pvu-Chr10 3500201 3501903 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0248 2 335 Glycoside Hydrolase AT3G23770 55.193 1.82e-139 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0248 - - pvu:PHAVU_010G0238001 703.36