Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0233 ATGAAGACTCTCTCTAAAGTAGCAATAACTTTATTATCAATGATGATGTTGCTTCCTAGCACAACACACTCAATTGTTGTAGAGTCCAATGAAAGCTATATCAAATCAGCTACTTTTTTGTCCGAAGAGTTTGAAGTGGGACCAGGAAAAATTGCAGTGAAAACATTATTAGATATTGACTTTCCAAAGGGTCACATTGGGGTCAAAAGTTTTGATGTTGAAGTAGTTGATGAAGATGGTAAATCTGTACCTTTGTATGAAGCTTACCTTCATCATTGGTTTGCTGTAAAATATATTGAGAATATCACCATGTCACACTACATTAAACAATCTCACGACCTTCGCAATGGTATCGAATTCGAAAGGAATGATGGTATGTGCCAAGGTTTTTTGCTTCCACATTATTGGGGCTTGGGAGGAGAATCACGAGGAACATCCTCAAATCTTCCAAATCCTTTTGCAGTTGAATTAGGTAATCCTACAAAATTAAAGGATGGGTTTAAAGAAAAATGGTTATTTAGCATCATGGTTATTGATACCCGTGGTGCACATGATAGAAAAGGTTGTTCAGAGTGTAGGTGTAAGCTTTTAAATCTCCCAAAGAACTTTTACAATGTTACAATGGGCATTAATGGTCAATTATTGCCAAGAAATTATAAAGGAGGACTATTTTGTTGTCAAGACAACTTACAGTGCAAATTAAGAAATGATTTCCATGGCCCAACAAGAAAGCTTTCCCTAAGATACAAAATAAGGTGGGTTGATTGGGATGAACACCAAATGCCTCTTAGGTTCTATATACTTGATTCAACTGATCGTGTAAGATCAAATGGTTCTACACTAATTCATGATTGTCAGGCAGAATATACTATTCCAAGAAATCATAATAGTGATTCCCCTCACGTTAAGAAAGCAAACATCCCAATGACAAAAGGTGGCTATCTTATATATGGCACTGCTCATATGCACACCGGTGTTGTCAATACTACTTTATATGGACAGGATCGAAGGGTTTTATGCACTTCAAATCCAAAATATGGAACTGGAAAAGAAGCAGGAAATGAAAATGGTTACCTAGTTGGAATGTCAGTTTGCTATCCAAAACCTGGTTCTATCAAGATTAAAGACGGCGAAATTCTAACATTAGAATCCATATACGAAAACAAGTTTCGTACTGGGGCTATGGGGCATTTCTATATTTATTTGGCAGATCAAATACCAAACAAAAATTTGACAATTTGA 1242 0.3599 MKTLSKVAITLLSMMMLLPSTTHSIVVESNESYIKSATFLSEEFEVGPGKIAVKTLLDIDFPKGHIGVKSFDVEVVDEDGKSVPLYEAYLHHWFAVKYIENITMSHYIKQSHDLRNGIEFERNDGMCQGFLLPHYWGLGGESRGTSSNLPNPFAVELGNPTKLKDGFKEKWLFSIMVIDTRGAHDRKGCSECRCKLLNLPKNFYNVTMGINGQLLPRNYKGGLFCCQDNLQCKLRNDFHGPTRKLSLRYKIRWVDWDEHQMPLRFYILDSTDRVRSNGSTLIHDCQAEYTIPRNHNSDSPHVKKANIPMTKGGYLIYGTAHMHTGVVNTTLYGQDRRVLCTSNPKYGTGKEAGNENGYLVGMSVCYPKPGSIKIKDGEILTLESIYENKFRTGAMGHFYIYLADQIPNKNLTI* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0233 413 Pfam Stress up-regulated Nod 19 34 405 IPR011692 -
Pvu10g0233 413 PANTHER STRESS UP-REGULATED NOD 19 PROTEIN 3 408 IPR011692 -
Pvu10g0233 413 PANTHER STRESS UP-REGULATED NOD 19-RELATED 3 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0233 Pvu-Chr10 3317951 3319503 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0233 - - pvu:PHAVU_011G142100g 735.332