Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0228 ATGGTTGAAGTTGAAGAGATAGAGCTCGATTTGGCGCTCTCCATTGGAGGCACTTTCAAGCACACCGTGCACGGCCCCGCACCCGATTCCAAACCCGATTCCTTCACACGCCTCGCCGTGGAACCGCACGACAAGCGCGAGATTCAAGCGCTGCGGCGAATGGAGGCCAAGAAGAAGCGGGAGCAGAAGAGGGAGCGCGGCAGGGAGACCGAAGTCGAGTGGGAACACCTTTTTAAGAAGGAGAAGACGGAATGCCATAACGCCGTTACTGGCTTTGCGCCGTGGAGAACCTCCGACCCGTTCCGCGTTCAACAGTTTGCCACGGTGCAGTACTTGCCGTTGAATAACGGCTTTCCGTTACCGTGCTGGGTCGGAGGCCAGAAGAATGCAGGTGGAGTTGACGGCGGTAACGGCTGTGATAAGAAAGCGTCGAAGTCTAACGGGTCTTCTCGGTGCAGTTCTTCTGCGGTTTCGGATTACCTGAGCTCTTCTCGTGAAGATGGGGGAAGCACTGATAGCCACAGCCATTCAGTTCATTCTTGGGCAGAACAACCCCATTTGACCACTTCCAAGGAAATAAGCATAGGAACAACCCAACCTGAAGAAAGTGCTTCTGCTTCATCTCACACCATGAAACCCAAACAAGGCAACAACACGCAGGAAAGAAAGCACATTGCAAAGGAAACTCAACCAAAACCAAATCCAAATCCAAAACCCTCTTCACCTGAGCATGTGAAACTGAAGCAAGAACCTCCCAGAAGCCACGATGCACTTCCAACAATGCAAGTTGACAAGTCTTTGTGCAACGAAAACTCAAGCCCCTTGATGGAGAACAAAGGTGACCTGGGAAAGCCCCCTAAGCCTCTCTCTCACACCTCCTTACTCCCTCAAATGCCTTATGTCTCCACAAAAGGGAACAATGGGAAAACTGTTAATGGGTTCCTATACAGATATAACAAATCTGAGGTTAGCATTATTTGTGCCTGCCATGGAAGCACATTTTCACCAGCGGAGTTTGTGCAGCATGCAGGGGGCACAGACATCACACACCCTTTAAGGCATATCACAGTAATTCCTTCTGCCTTGGGCTGA 1092 0.5092 MVEVEEIELDLALSIGGTFKHTVHGPAPDSKPDSFTRLAVEPHDKREIQALRRMEAKKKREQKRERGRETEVEWEHLFKKEKTECHNAVTGFAPWRTSDPFRVQQFATVQYLPLNNGFPLPCWVGGQKNAGGVDGGNGCDKKASKSNGSSRCSSSAVSDYLSSSREDGGSTDSHSHSVHSWAEQPHLTTSKEISIGTTQPEESASASSHTMKPKQGNNTQERKHIAKETQPKPNPNPKPSSPEHVKLKQEPPRSHDALPTMQVDKSLCNENSSPLMENKGDLGKPPKPLSHTSLLPQMPYVSTKGNNGKTVNGFLYRYNKSEVSIICACHGSTFSPAEFVQHAGGTDITHPLRHITVIPSALG* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0228 363 MobiDBLite consensus disorder prediction 142 215 - -
Pvu10g0228 363 PANTHER AFP HOMOLOG 2 2 361 IPR031307 GO:0007165
Pvu10g0228 363 MobiDBLite consensus disorder prediction 138 301 - -
Pvu10g0228 363 PANTHER NUCLEAR TRANSPORT FACTOR 2/RNA RECOGNITION MOTIF PROTEIN 2 361 - -
Pvu10g0228 363 Pfam Tify domain binding domain 323 356 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0228 Pvu-Chr10 3262614 3264657 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0228 - - gmx:100809595 422.935