Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0218 ATGGGAGGTTTAAGTGGTTTGTTGGTGTTTTCTTTGGGAATTTTGATCCAAATAAGGTACTGTCATAGCAGCAGCATTACAACATGCTTGCCTCAGAACTATGCTGCACTATTCATATTTGGAGATTCACTATTTGATAATGGAAACAACAACTACATCAACACCACCACCTCTTACCAAGCAAATTATGCTCCCTATGGACAAACTTTCTTCAAATACCCCTCTGGCAGGTTTTCTGATGGACGCATGATATCAGATGTTGTTGCTGAACTTGCTAAGTTGCCCATACTTCCACCATACTTGCATCCGGGTCGTGTTGAACAGATCTATGGAGTCAATTTTGCTTCAGGAGGTGCAGGTGCTCTCAGTGAAACTTCTCAAGGATTTCGTATCAGCTCAAAAGAAAGACTTTGTCTCCTTGCTATCTACTGCATTTTCCAAACATCCATTATGATTATAGTTGTATCCCAAGAGCATTCCTCTCATGCAAACCAAGAATCCAACCAAAAGCAAAGAAAGGGCGTTAATCATCAATGCTATAGACCTAAAACTCAGCTAAGTTATTTAAAAAACCTAAAGAATTTATTTAGTGAGAGAGTGGGAAAAGAAATAGCAGAGGAAATTATGTCAAAATCTGTGTACCTGTTTAGCATTGGAAGCAATGACTATGCCTCTCTTCTCAACACAAACTCAAGTTCTGTGCTTCTTCCAGGTGATCATCAAGGGTTTGTAGATACTGTGATTGGAAACCTCACAGAAGTCATAACAGAAATTTATAAGCTTGGTGGAAAGAAATTTGGATTTGTTAATATGGGTCCACTAGGTTGTTCACCGGCCATAAGGGTTTTGGTGAATAATGGAAGCACATGCTTTGAAGAATTTTCAGCCATTGCAAGGCTACACAACAATGCACTCTCAGAAAAGCTTCACCAGCTAGAGAAACAGCTCAAGGGTTTCAGATATTCAATCAATGATTTCTATGGTGCATTTTCTGAAGTGCTGAACAATCCTACAAAATATGGTTTCACAGAAGCGAGTGTGGCATGTTGTGGAGGTGGAGCATATAGAGGAGATGGTAGTTGTGGAGGGAATAAAGGGTTAAAAGAATACGAGTTATGTGAGAATGTGAATGAACATTTGTTCTTCGATTCTAATCATCTTACTGATAGAGCTAGCCAGCATTTCGCAGAGCTGATATGGAATGGAAATCACACTGTCACAGCTCCTTACAATCTTAAACAACTGTTTGAATTTTGA 1257 0.3922 MGGLSGLLVFSLGILIQIRYCHSSSITTCLPQNYAALFIFGDSLFDNGNNNYINTTTSYQANYAPYGQTFFKYPSGRFSDGRMISDVVAELAKLPILPPYLHPGRVEQIYGVNFASGGAGALSETSQGFRISSKERLCLLAIYCIFQTSIMIIVVSQEHSSHANQESNQKQRKGVNHQCYRPKTQLSYLKNLKNLFSERVGKEIAEEIMSKSVYLFSIGSNDYASLLNTNSSSVLLPGDHQGFVDTVIGNLTEVITEIYKLGGKKFGFVNMGPLGCSPAIRVLVNNGSTCFEEFSAIARLHNNALSEKLHQLEKQLKGFRYSINDFYGAFSEVLNNPTKYGFTEASVACCGGGAYRGDGSCGGNKGLKEYELCENVNEHLFFDSNHLTDRASQHFAELIWNGNHTVTAPYNLKQLFEF* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0218 418 CDD SGNH_plant_lipase_like 36 403 IPR035669 -
Pvu10g0218 418 SUPERFAMILY SGNH hydrolase 195 401 - -
Pvu10g0218 418 Gene3D SGNH hydrolase 26 405 IPR036514 -
Pvu10g0218 418 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 20 137 IPR044552 -
Pvu10g0218 418 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 182 416 IPR044552 -
Pvu10g0218 418 Pfam GDSL-like Lipase/Acylhydrolase 37 399 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0218 Pvu-Chr10 3151429 3155830 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0218 19 416 Acyl Lipid Metabolism Gene Families AT4G10950 27.475 2.80e-38 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0218 - - pvu:PHAVU_010G021000g 841.647