Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0214 ATGATTTGCCAGGAAGTACTTCAAACAGGCATGGGATCTTCCAAAACTCATGCTATATTTCTTCCACATCATGTCAATCCTGCAATCTTGGATTTGATACTTGATTACTGTCGGTTTCACCAAGTACCAGGACATTCTAACAAAGAGCTCAAAAATTTTAATGAGAAGTTTATTCGGATAGATACAAAGAAGTTATGTGAGTTAACATCTGCTGCTGACAGCCTCCAACTGAAGCCTTTGGTTGACCTGACCAGTCGAGCACTTGCTAGGATTATTGAAGGAAAAACCCCTGAGGAGATTCGTGAAACATTTCATTTGCCTGATGACCTCACTGAGGAAGAGAAGCTGGAGCCTCTGAGAAACATGACCGATGATCCACGTATTCGACTTCTAAACAGATTGTATGCTAGAAAGAGGAAAGAACTACAAGAGAGAAAGAAACTGAAGGATGTTGTGGTTGAGGAGGAACCAAAGGATGAACGTTCAGTTGAAGATCTTCTATCATTTATTAATGGCGCAGATGGAGATATAAAGGGAACTAGAGCAAATAAAAATAAAAAGAATAGAAGGAAAGACCAGGCAAAGGATCTTTCTTCAAAAAATGCAAATATAAACAATAAGGGGTTGAATCTTCTTCCTTCTGCATATCACAATGTCAATTTTGACAAGGCCTTAGAGGCCTCGGCCAGTCAACACTCAAGGATGCAAACCCTTCCAGCTGTTAATTTTTCTCCAAAATTTGAATTGATTGATGGTGATGTTGACGATGATTTCGATCCTGCTATGAAGGAGGAGCTTGACAGGGAAGTGGAAGATTTTGCACGAAGATTAAATTCAGATTGGCCTGAAAGGATGCAAATTTTATCTTTGGGTCAAGACAGAAGACTGGTACCAATTTCTGTGAATGGCAATGGTGCAACGCACCTGTACACAAGTCTGTGTTGA 945 0.4 MICQEVLQTGMGSSKTHAIFLPHHVNPAILDLILDYCRFHQVPGHSNKELKNFNEKFIRIDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNMTDDPRIRLLNRLYARKRKELQERKKLKDVVVEEEPKDERSVEDLLSFINGADGDIKGTRANKNKKNRRKDQAKDLSSKNANINNKGLNLLPSAYHNVNFDKALEASASQHSRMQTLPAVNFSPKFELIDGDVDDDFDPAMKEELDREVEDFARRLNSDWPERMQILSLGQDRRLVPISVNGNGATHLYTSLC* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0214 314 MobiDBLite consensus disorder prediction 177 202 - -
Pvu10g0214 314 SUPERFAMILY Skp1 dimerisation domain-like 50 120 IPR036296 GO:0006511
Pvu10g0214 314 PANTHER OS03G0107000 PROTEIN 1 210 - -
Pvu10g0214 314 Pfam Skp1 family, dimerisation domain 78 115 IPR016072 GO:0006511
Pvu10g0214 314 PANTHER SKP1 1 210 IPR016897 GO:0006511
Pvu10g0214 314 Gene3D Potassium Channel Kv1.1; Chain A 1 123 IPR011333 -
Pvu10g0214 314 SMART skp1_3 1 77 IPR001232 GO:0006511
Pvu10g0214 314 Coils Coil 131 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0214 Pvu-Chr10 3106509 3108054 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0214 - - pvu:PHAVU_010G020600g 605.905