Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0210 ATGTTCTATCTCAGTAAAATTGAACACAAATTGCCCCTGCCTCCTAGTCGTCTTGTTCTTCCCATTCGAGAAGCTATTCACATGGAGCTTGAAAAACTTTTCTTAGATAAGGTTATAGCAAACGTGGGCCTTTGCATTTCTGTCTATGATATCAGATCCATTGACGGTGGGTTTATCTTCCCAGGTGATGGGGCTCCAACCTATACGGTTGTATTCAATTTAATTATGTTTCGTCCATTTGTGGGGGAGATTATTACTGCAAGGCTTATTTCATCTGATTCTGATGGCTTACGATTAACTCTTGGATTCTTTGAGGATATTTATGTCCCTGCACATCATATGCCCTACCCAAACCACTTTGTTGAGGATGAACAAGGAAAAAGGGTATCCTCTAGCGAAGAGTCAACAACTAATTCTGTGAGGAAAGGCGTATGGTATTGGGATTTTAACGAACAAGAATATCCTATTCAAGAAACTGATGTGATCAAATTTCGAGTACAAAATGTGAGTTATCCGCAGATTCCGGTTGAGCAACCGAAAGAATCAAAGCCATTTGCGCCTATGTTGGTTACTGGATCGTTAGATCATGATGGTCTAGGCCCTGTTTCTTGGTGGTGTGCAGAAGAGATTGAGGTTGATGATGAGTAA 648 0.4074 MFYLSKIEHKLPLPPSRLVLPIREAIHMELEKLFLDKVIANVGLCISVYDIRSIDGGFIFPGDGAPTYTVVFNLIMFRPFVGEIITARLISSDSDGLRLTLGFFEDIYVPAHHMPYPNHFVEDEQGKRVSSSEESTTNSVRKGVWYWDFNEQEYPIQETDVIKFRVQNVSYPQIPVEQPKESKPFAPMLVTGSLDHDGLGPVSWWCAEEIEVDDE* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0210 215 Gene3D - 80 205 IPR012340 -
Pvu10g0210 215 PANTHER DNA-DIRECTED RNA POLYMERASE II, III 1 214 IPR045113 GO:0006352
Pvu10g0210 215 CDD RNAP_III_Rpc25_N 2 81 - -
Pvu10g0210 215 Gene3D - 1 79 IPR036898 -
Pvu10g0210 215 Pfam SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 8 64 IPR005576 GO:0006351
Pvu10g0210 215 Pfam RNA polymerase III subunit Rpc25 83 205 IPR013238 -
Pvu10g0210 215 SUPERFAMILY Nucleic acid-binding proteins 79 201 IPR012340 -
Pvu10g0210 215 PANTHER BNAC08G44960D PROTEIN 1 214 - -
Pvu10g0210 215 SUPERFAMILY N-terminal, heterodimerisation domain of RBP7 (RpoE) 1 78 IPR036898 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0210 K03022 - gmx:100800770 369.007