Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0209 ATGGTGAAGGTTCCTGTCAGTGACAAGGAAGGAAGCTCAGTAATGGAGAACGGTGGGTACAGTGATTATCAGTTAGTTCGTCACTTCAGAAGCGTACTTGAGGAAGTCACAAAGGGTGATAGAGGGAATTATGATGAGCTAGTTGGTTATTTGCACCCGAAGAAGAATCTCAATCCCGATGAGGTCGCGATTCTTGTGACAACTCTGAGGGCACTTTCTGGAGCAGTGTGCTGTATAGATCCTAATCATCACGAATCTCTTCTCTTTGCTGTTTCAAGAATGAGCCTCTGGAATTATGGAACGGAGGTTATGGATGCACTGCTGGAACTCATTATTTCTTTGGCTGCTTCCAATGGGAAATACATTGATTGGTGTTTGGAGATGCTTGTGAAACATTTTGTGCCCCCTTTTTACCTTATTGATTCTCTGAACAATGAGAATGGAATTGACAGGAAAAACAAAGTTCTGTCTCGGGTGCATGCAGCTTTGAAAGAGATAGCTGATTTGGTGCCTCTTGCCCCATTGCGACTATGTCCAATAGTTGTCCAGAATATGCCCAATGTCTTCAGTAAGGAACGTGAGATTGTCATCTATTTTGAGAATATGTTTAAGTTGGAGGGTGGTGCAATTGGAGAAATTGTCGGTGCTACAATTCTGCCTGCTCTTGTGGATAGGTTGCTAGAGTTGGATGTGGAAATTGGATGGGATGGAATCTTGCAAGAAGATTCCAGAGGCATATTTGATATGGAGTTAGAAGATATTATTAAACTTGCAGACGAGGATGACAACTGTCATAATATGCCTCAGTCAGAGTTGTTAAATAGGAAAAATTTGCAAGGCAACCAGGTTGTTGAAAAATTAGATAGTCTAATTGTGCTAGCTTTATTGCACCTTGAATCCTGTCAAAGTAGTGGCCGTTTGACTGAGGTATTCGATGTTCTACTTCCTTCATTTCAAAAAACTGTATTGAACGCATACAAGTCAAAATTTACCCAGTTTGTGATGTTCTATGCGTGTGCACTGGACCCTGAAGGGTGTGGTGTGAAATTCGCCATGGTTCTTGCAGATATGTTTGCTTCTGATCTTAACCCACCTATTACAAGGATGAGTGCTGTTGCTTATCTTGCTAGTTATCTCTCTCGTGCAAAGTTCCTTTCAGCTGCATTGGTCACTACCATCATACAAAGCTTGGTTGATCTGTGTTATGCTTATTGCAAGTTTCGTGATTCTGATTTGAACCCACGAGCACATCAAGTTTTTTATTCTGGATGTCAGGCTATCATGTACATTATGTGTTTTCGCATGAAATCTCTGATGGACGTTCCTAGGCTTAAATTGCAGCTACTTAATATGCCCATGGAGGCAATCTGGAAACATAAATTGAGTCCGTTGAAGGTGTGTTTACCTACTGTAGTAGTGGAATTTCTTAGACAGGCAAAGGCTGCTAAACTTTTCATGGCATCAGAGTCATTTGTTTTCGATGACATGCTCGAGTCTGATCTTTCCAAGGCTTTTGGCGGGATGGATAGACTTGACATGTTCTTTCCGTTTGATCCATGTCTCTTGAAGAAAAGTGAAAGCTACATAAGACCACATTTTGTTCGGTGGTCAAAAGTCAGAACCACATACGATGAAGATGATGATGACATTGGCGAAGTGAGTGACAGTGGCAGCGAAGTATCAGATGATGATTTTGTTGACACCAATACAAGAGATATGATTGATGATGATCTGATGGTGACAGTTGAAGATCTTGATTTTAACCCTGACTTGAACAAAATGTCCATCACGCCCAAAAATTCTTTGAAATATGGGCGAATGCCAGCAAGAATCAGACCTTCCACTAGTCCAGAGTCTCTATGA 1863 0.4128 MVKVPVSDKEGSSVMENGGYSDYQLVRHFRSVLEEVTKGDRGNYDELVGYLHPKKNLNPDEVAILVTTLRALSGAVCCIDPNHHESLLFAVSRMSLWNYGTEVMDALLELIISLAASNGKYIDWCLEMLVKHFVPPFYLIDSLNNENGIDRKNKVLSRVHAALKEIADLVPLAPLRLCPIVVQNMPNVFSKEREIVIYFENMFKLEGGAIGEIVGATILPALVDRLLELDVEIGWDGILQEDSRGIFDMELEDIIKLADEDDNCHNMPQSELLNRKNLQGNQVVEKLDSLIVLALLHLESCQSSGRLTEVFDVLLPSFQKTVLNAYKSKFTQFVMFYACALDPEGCGVKFAMVLADMFASDLNPPITRMSAVAYLASYLSRAKFLSAALVTTIIQSLVDLCYAYCKFRDSDLNPRAHQVFYSGCQAIMYIMCFRMKSLMDVPRLKLQLLNMPMEAIWKHKLSPLKVCLPTVVVEFLRQAKAAKLFMASESFVFDDMLESDLSKAFGGMDRLDMFFPFDPCLLKKSESYIRPHFVRWSKVRTTYDEDDDDIGEVSDSGSEVSDDDFVDTNTRDMIDDDLMVTVEDLDFNPDLNKMSITPKNSLKYGRMPARIRPSTSPESL* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0209 620 Pfam RNA polymerase I specific transcription initiation factor RRN3 22 540 IPR007991 GO:0001181|GO:0006361
Pvu10g0209 620 PANTHER TRANSCRIPTION INITIATION FACTOR IA RRN3 21 609 IPR007991 GO:0001181|GO:0006361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0209 K15216 - gmx:100814416 1028.85