Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0196 ATGAATGGATATAAATCAGGATCTGCTCTCCTTGTAAATGCTGAGGTTGATTCTATGGGAGGAGTTGTTGATGGCGGAGTTGGGATAGGTTTGAAGATCTCTCCGCGCAGAGTAGCAATTGAAAAGGCTCAAGCAGAGCTCAGAGAGGAGTATGATGCTCGTGAAGAAAGAAGAAGAGAGCTTGAATTTCTTGAAAAAGGTGGGAATCCTCTGGACTTCAAGTCTGGGAATGGTGCTTCAGTTAGTGTGCAGTCTACTTCAATCACTGATCAGCCTCATGAGCAGTTTGTGACCAGTGAAGCAAAAGGTAGTTTTGCATTGACTGCCTCTCCTCATGCTGACTCTGTTGACAGTAGTGCTAGACCAGGGCCTCCTTTGGCTAGTGAACCTAATACTGCTGATAATCTGCTACTTTTTGATCGGGAGAATGAGTTGCCTGAAACTGAAAGGAGGTGCTTGAATAGGAGGAATAATATTGCTGCGTCAGAACAGTCTTCCCAAATTGATGGAAGTCAAAATGCTAAGGAGACTGAAGATTCTGCTATTTTCCGGCCATATGCACGAAGGAACAGATCTAGACCAATTCATGGTACTCGGGGGGCTTCAAGGGAAGCAAAGGGGTTAATTTTGGAAACAAATAACCATAAGAACCCTAATTTACCGACCATATCTAAGCCAAAGCCTTCCAGTTTAAATGGTGATATTGGTACTAAAAATTTAACAACTAATAATGCACTGAATGATGAATTGGTTGGGATCCGAGATCACCAATCCACTAGTGGTTGTGCTAGTGTTCCCAAAGACAAATTGGATATTATAGTGAACATAAACATAAAAGAAAATCATGGAACTCTACCTTCTGAAGATCATACTGTTCAAAACCCAATTCTCATGGCTACTGGAGAAGCTAAAGTGGTTGAATTAAGCGAATCGGTAGCTGCTGTCAATCGTGAGTCTCCATCTCATAAACCTGCTACAAAATCTGAAAATAGGCCTTATGATTGTCAGCCAAATGGATTTGGCAATGTAGAAGTAGACAGGAAAAGTGGAACAAATGAAGGCCAAAATAATGTTGATAGATTAGGCAAGAAGAATTTTGATTTAGAGTCCTCGTGCGCAAGAACTAGTTTAGATAGGCATGTAAATAATGATAGTGATATGTGTACTAATACAAATAGTGTTGATGCTAATGAAAATACCATGGAACAAACATTTGCATTAGGGAATAAGCTGAACTCTGCCAACTGTGAAGTTGTGAAAGGTAGGCATAAGACCAAAAATGGTGCTACTGTTTGCAATGAACATGATGCTGGTTGTCAAGATCATTCTGGTAGTGATAATATCGTCAAAGCTGAGGAAGATTTCCATATTAATAATTCTTCCGTGTCAAATATGAAGGGAGTACATAATGACAGTGCCATATCAAAAGCCGATAAAGATACTGTTTTAGTAGATCAGTTGAATTCTGTCAAGGAAAGCAGCTCTGAAAGACATCAGGTTCCTGTGGATGTGTCACTATCAGAATCTCCTCAGACTGCTCCAGCTGAAAAGGTTAAGAGCACCACCTCTTATGATCAACCATGTGCTATGCACAATATGAAGTTAGTAGACAAGGCCCATGAAGATTTTATTTTGGAAGAGGCTCAAATTATAGAGGCCAAGCGAAAGAGAATTGCGGAGTTATCTGTTCACTCATTATCAACACAGAACCACAGGAAGTCACATTGGGGTTTTGTTCTTGAGGAAATGGCATGGCTGGCAAATGATTTTGCACAGGAGCGTCTCTGGAAGATATCTGCTGCTGCACAATTGGGTCATCAAACAGCTTTTACTTGTATGTCAAGATTTGAAAAACTAAATAAACAATTAGAGACAAAATTTTTGTCTCACAAGATAGCAAAGGCTGTCTTGCAGTTTTGGCATTCAGCCGAGCTTCTTCTAGACAATGATCTTGACATAAACTGCATCGTGGGTTGTGTTGAATCTGGGAATGTTGATGCAAATGAAGCTACGAGGGATCAGAGAAGAAATTACAATACGCTGCTGGAAACAAGCACATTTGTGGAGGGACAAAATTCTGTAAAACATGCTGCACGTAAAGTGCATGCATATGCTTTGAGATTTCTAAAGGCTAATAGGTCTCATGGAATTTCCTCTCAAGCGGAGGCACCAACAACTCCTGAAAAGATTTTTGATTCAAGCACTGTTGATATGTCATGGGATGAGCATCTTAATGAAGAAAATCTTTTCTATGAAGTTCCTCCTACTGCAATGGAAATATATAGAAAAGCTATTGAATCTCATTTCCATCATTTTGAGAATAAACATTTTCAGAAAACTGGGAGTAGCATGCAAGAGGAAGTTGAAACATCTGTGTATGATACCACAGCAGAGTTTGGATCCCAAGAGAATGGATATGATGAGGAAGAAGGAGAAAATAGCACTTATTACTTGCCCAGTGTCTATGAGGGCAACAAATCATCAAAATCTGCACAGAAGAAGCATAAAAATTTGAAGTCTTATGCTCCTAGGTGTGGTGATGCTGGTGCTGATTTGTCTTATGTACACTATACAACTGGATCTCAACCATCCATCATGTTTGGAAAAAGACCTGCTAGTTTAAATGTTGGGTCAATACCAACAAAGCGCATGCGTACTGCTACTAGGCATAGAGTTGTAAGCCCTTTCACTAACATTGGGACAGTACAAGCTCAAGCTAAGGCGGATGCTTCAAGTGGTGATACTAATTCCTTTCATGATGACCAGAGTACTTTACATGCTGGACCCCTGATCCAGAAAAGTTCTGAGGTGGAGTCAGTTGCAGATTTTGAAAAACAGTTATCTTATGATTGTGCAGAAACATTTGTTAAAACAAAGAAGAAGAAGAAGGCAAAGACTTTGGGTTCAACGTATGATCAGGGGTGGCAATTGGATTATGTTGTCCTAAATGAACAGAGGGATCAGTCCAAGAAGAGAGGGGATAGTCATCACTTTGAATCTAATGGTTTGTATGGGCAACATAATGGAAAGAAGCCAAAGATAATGAGGCCACTTGATAATCCTTTGGACAATATTGTGCCACTGACTAATTCTATTCCTTCCCCTGCTGCTTCACAAATGAGTAACTTGTCAACTCCTAATAAGTTTATTAAGATCATTAGTGGAAGAGACAGGGGCAGGAAAGCTAAATCTCTGAAGATTTCTGCTGGACAGCCTGGTTCTGGAAGTCCTTGGTCACTATTTGAAGATCAGGCTCTTGTGGTCCTGGCGCATGATATGGGTCCAAACTGGGAGCTCGTAAGTGATGCTATCAATAGTGCTCTCCAAATCAAGTGCGTCTTTCGCAAACCAAAAGAGTGCAAGGAGCGTCATAAAATTTTAATGGATAGAACTACTGGGGATGGTGCAGATAGTGCTGAAGATTCAGGGTCTTCACAGTCTTATCCTTCTACGTTACCTGGAATTCCTAAGGGTAGTGCCAGGCAGCTGTTTCAACGGTTACAGGGGCCAATGGAGGAGGATACATTGAAGTCTCATTTTGAGAAAATTATAAAGATTGGACAGAAGCAACATTACCTAAAGAATCAGGTTGATAACCAGGATTCAAAACATTTAGTGCCTGCCCATAATTCACATGTGATGGCTCTTTCCCTAACCAGTCCCAACAACCTGAATGGAAATCTTTTAACGCCACTTGATCTCTGTGAAGCTGAAGAAATAAACCCAGATGTCCCAGCCCTAGGGTACCAAGGTTCTCATCCTGGTGGTCTGACTTTACCACATCAAGGTTCTGTACAGTCAATGCTTCCCGCATCTGGGGTGAACTCTTCACTACCTGGGTCTTCTGGTATGGTTCTTGGCCATAACTTGTCATCTTCATCTGGTCCAACCACAGCATCTGTCAGGGGTGGTAGATATGGAATTCCGAGGAATTCTCCTTCATCAGTGGATGAGCAACAGAGAATACAATACAATCAAATGTTATCTGGAAGAAACATTCAGCAGAGCATTTCAGTTACTGGGACACTTTCTGGAAGTGATCATGGTGTCCGCATGCTTCCTGGTGGAAATGGCATGGGCATAATGGGTGGAATTAACAAAGCCATGGCAATGTCTAGGCCAGGGTTTCAAGGAATGGCATCACCATCGATGCTTAATTCCGGAAGCATGATTTCCTCTAGTATGGTTGGAATGCCAAGCCCCGGAACTATGCACTCTGGAGTTGGCCCTGGAGCAGGCAACTCAATTTTAAGACCTCATGAGACTCTACATATGATGAGGCCCGGCCATAACCCAGAACATCAAAGACAAATGATGGTTGCAGAGCTTCAGATGCAGGTCACCCAAGGGAACACTCAAGGTATTCCTGCTCTATGTGGGCTGAGTTCTGCCTTTAGCAATCAGACAACAGCGCCTGTTCAGCCTTATCCAGGACATGCACAGCAGTCACACCAACTCTCGCAGCAGCAGTGCCATCTTAGTAATCCTCGCCCTCATCTTCAAGGTCCAAGTCATACTAATTCACAGCAGCAAGCCTATTCTGTTCGGTTAGCAAAGGAAAGGCAAATGCAGCAACGATATCTCCAGCACCAGCACCAGCTTGCTGCATCAAATGCATTGATGCCACATGTCCAGGCAAAGTCTCAACTTCCCATATCATCACCATTGCAAAACAGTTCTCAAGTTCAACCACAAAATTCTTCTCAGCAAGTCCCACATTCACCTATAACGCCACCATCCCCTTTGACTCCCATGTCATCCCAGCTCCAACAGCAGAAACTTCACCAGTCACAACCTGCGTTTAGCAGAAATTCTCCTGCTAGTGGGCTGACTAACCAAGCAACAAAGCAACGCCCACGACATCCGTCACAGCAGCCACTGCCGCCACAGCAGTATCAACAATCTGGTAGGCAGCATCCTAATCAACGGCATAATGTTCAGTCTCAACAGCAGGCAAAACTTCTGAAGGGAATGGGAAGAGGAAGTATGTTGGTCCATCCAAACCTCTCTGTGGATACTTCTCATCTAAGTGGTGAAAAAGGGGACCAAATCTTACACATGATGCAAGGTCAAAATATATATCCGGGATCTGGTTTAAACCCAAATCAGCCATCGAAGCCTTTGGGTCATGCTCATTCTTCAAATCATTCACAGTTGCCGCAGAGGCTTCATTCGGGGTCACCAACCACTTCGTCAAAGCAACTTCGTATTCCTTCTGATACTAGTGTTCAAGCTCAAGTTTCACCAGCTTCATCAGGCCAGTTGTTGTCACCTCCACAGCCAGCTGTTATTGCTTCTAACCACCATCAGCTGCAGCCACAGACTCAGTCTAAGAAAATTAATCATACTCAAACAAACATTCAGAGAATGTTGCCGCTAAAACATCCTGTTCATTCCGAGTCATTAAATTCTGATCCAATTCAAGCTGATCAACAGCCTGCAAACAGCGGTTCCCAGGTTAGCACCTGTGCTACAATGGCTCAGAGTTGTATGGATCCTGTTAGTGCTGTACCAGTTATTACCACAGTATCTTCTCAATGGAAAACAGAAGAACCACCATTTGATTCCACTATGAACAATCAAACCACTCAAATGAACTCCTTGGGAAATGCACCTGCTGGAAATTCCACTGGAAATGAGCAACCAACAACTAGTCAAGGATTGGAGCCAAGATCAGTTAGCTTGACTTGTCATGCACATAATTCTGATACACAGTGGCAAAAACGTCAGGTACAACCTCTCCAACAGTCATCGCAACCCCTCCTATCTCAGCAGCCATATCAGACTGAGCAGCAGCAACAGCATGAGAAAGAGGAATATTCTCCCAAAGATCTTGTTTTACAACCTCAACAACATATGCAGCATCTACAATCAGGGAAGAGCAGTATGTTTATCCAGCCACCTAATTCTAATGTTGAATGA 5922 0.4255 MNGYKSGSALLVNAEVDSMGGVVDGGVGIGLKISPRRVAIEKAQAELREEYDAREERRRELEFLEKGGNPLDFKSGNGASVSVQSTSITDQPHEQFVTSEAKGSFALTASPHADSVDSSARPGPPLASEPNTADNLLLFDRENELPETERRCLNRRNNIAASEQSSQIDGSQNAKETEDSAIFRPYARRNRSRPIHGTRGASREAKGLILETNNHKNPNLPTISKPKPSSLNGDIGTKNLTTNNALNDELVGIRDHQSTSGCASVPKDKLDIIVNINIKENHGTLPSEDHTVQNPILMATGEAKVVELSESVAAVNRESPSHKPATKSENRPYDCQPNGFGNVEVDRKSGTNEGQNNVDRLGKKNFDLESSCARTSLDRHVNNDSDMCTNTNSVDANENTMEQTFALGNKLNSANCEVVKGRHKTKNGATVCNEHDAGCQDHSGSDNIVKAEEDFHINNSSVSNMKGVHNDSAISKADKDTVLVDQLNSVKESSSERHQVPVDVSLSESPQTAPAEKVKSTTSYDQPCAMHNMKLVDKAHEDFILEEAQIIEAKRKRIAELSVHSLSTQNHRKSHWGFVLEEMAWLANDFAQERLWKISAAAQLGHQTAFTCMSRFEKLNKQLETKFLSHKIAKAVLQFWHSAELLLDNDLDINCIVGCVESGNVDANEATRDQRRNYNTLLETSTFVEGQNSVKHAARKVHAYALRFLKANRSHGISSQAEAPTTPEKIFDSSTVDMSWDEHLNEENLFYEVPPTAMEIYRKAIESHFHHFENKHFQKTGSSMQEEVETSVYDTTAEFGSQENGYDEEEGENSTYYLPSVYEGNKSSKSAQKKHKNLKSYAPRCGDAGADLSYVHYTTGSQPSIMFGKRPASLNVGSIPTKRMRTATRHRVVSPFTNIGTVQAQAKADASSGDTNSFHDDQSTLHAGPLIQKSSEVESVADFEKQLSYDCAETFVKTKKKKKAKTLGSTYDQGWQLDYVVLNEQRDQSKKRGDSHHFESNGLYGQHNGKKPKIMRPLDNPLDNIVPLTNSIPSPAASQMSNLSTPNKFIKIISGRDRGRKAKSLKISAGQPGSGSPWSLFEDQALVVLAHDMGPNWELVSDAINSALQIKCVFRKPKECKERHKILMDRTTGDGADSAEDSGSSQSYPSTLPGIPKGSARQLFQRLQGPMEEDTLKSHFEKIIKIGQKQHYLKNQVDNQDSKHLVPAHNSHVMALSLTSPNNLNGNLLTPLDLCEAEEINPDVPALGYQGSHPGGLTLPHQGSVQSMLPASGVNSSLPGSSGMVLGHNLSSSSGPTTASVRGGRYGIPRNSPSSVDEQQRIQYNQMLSGRNIQQSISVTGTLSGSDHGVRMLPGGNGMGIMGGINKAMAMSRPGFQGMASPSMLNSGSMISSSMVGMPSPGTMHSGVGPGAGNSILRPHETLHMMRPGHNPEHQRQMMVAELQMQVTQGNTQGIPALCGLSSAFSNQTTAPVQPYPGHAQQSHQLSQQQCHLSNPRPHLQGPSHTNSQQQAYSVRLAKERQMQQRYLQHQHQLAASNALMPHVQAKSQLPISSPLQNSSQVQPQNSSQQVPHSPITPPSPLTPMSSQLQQQKLHQSQPAFSRNSPASGLTNQATKQRPRHPSQQPLPPQQYQQSGRQHPNQRHNVQSQQQAKLLKGMGRGSMLVHPNLSVDTSHLSGEKGDQILHMMQGQNIYPGSGLNPNQPSKPLGHAHSSNHSQLPQRLHSGSPTTSSKQLRIPSDTSVQAQVSPASSGQLLSPPQPAVIASNHHQLQPQTQSKKINHTQTNIQRMLPLKHPVHSESLNSDPIQADQQPANSGSQVSTCATMAQSCMDPVSAVPVITTVSSQWKTEEPPFDSTMNNQTTQMNSLGNAPAGNSTGNEQPTTSQGLEPRSVSLTCHAHNSDTQWQKRQVQPLQQSSQPLLSQQPYQTEQQQQHEKEEYSPKDLVLQPQQHMQHLQSGKSSMFIQPPNSNVE* 1974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0196 1973 Pfam HSA domain 569 606 IPR014012 -
Pvu10g0196 1973 PANTHER CHROMATIN MODIFICATION-RELATED PROTEIN EAF1 A-RELATED 19 1969 - -
Pvu10g0196 1973 MobiDBLite consensus disorder prediction 1470 1512 - -
Pvu10g0196 1973 MobiDBLite consensus disorder prediction 140 156 - -
Pvu10g0196 1973 MobiDBLite consensus disorder prediction 212 232 - -
Pvu10g0196 1973 MobiDBLite consensus disorder prediction 314 338 - -
Pvu10g0196 1973 MobiDBLite consensus disorder prediction 1583 1653 - -
Pvu10g0196 1973 Coils Coil 40 60 - -
Pvu10g0196 1973 MobiDBLite consensus disorder prediction 1902 1973 - -
Pvu10g0196 1973 SMART bromneu2 564 629 IPR014012 -
Pvu10g0196 1973 MobiDBLite consensus disorder prediction 1554 1653 - -
Pvu10g0196 1973 MobiDBLite consensus disorder prediction 1801 1818 - -
Pvu10g0196 1973 MobiDBLite consensus disorder prediction 1846 1888 - -
Pvu10g0196 1973 Pfam Myb-like DNA-binding domain 1078 1126 - -
Pvu10g0196 1973 MobiDBLite consensus disorder prediction 1693 1761 - -
Pvu10g0196 1973 MobiDBLite consensus disorder prediction 1554 1573 - -
Pvu10g0196 1973 MobiDBLite consensus disorder prediction 911 931 - -
Pvu10g0196 1973 PANTHER CHROMATIN MODIFICATION-RELATED PROTEIN EAF1 A-RELATED 19 1969 IPR044798 GO:0035267
Pvu10g0196 1973 MobiDBLite consensus disorder prediction 1797 1818 - -
Pvu10g0196 1973 MobiDBLite consensus disorder prediction 75 91 - -
Pvu10g0196 1973 MobiDBLite consensus disorder prediction 1902 1931 - -
Pvu10g0196 1973 MobiDBLite consensus disorder prediction 1137 1153 - -
Pvu10g0196 1973 MobiDBLite consensus disorder prediction 1290 1317 - -
Pvu10g0196 1973 MobiDBLite consensus disorder prediction 63 91 - -
Pvu10g0196 1973 MobiDBLite consensus disorder prediction 986 1019 - -
Pvu10g0196 1973 MobiDBLite consensus disorder prediction 911 930 - -
Pvu10g0196 1973 ProSiteProfiles Myb-like domain profile. 1076 1128 IPR001005 -
Pvu10g0196 1973 MobiDBLite consensus disorder prediction 1691 1761 - -
Pvu10g0196 1973 MobiDBLite consensus disorder prediction 489 523 - -
Pvu10g0196 1973 MobiDBLite consensus disorder prediction 110 232 - -
Pvu10g0196 1973 MobiDBLite consensus disorder prediction 157 178 - -
Pvu10g0196 1973 MobiDBLite consensus disorder prediction 1947 1973 - -
Pvu10g0196 1973 MobiDBLite consensus disorder prediction 1129 1156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0196 Pvu-Chr10 2903842 2928663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0196 - - gmx:100811365 3022.65