Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0189 ATGATGTTGTTTCCTAGCACAACACACTCAATTGTTGTAGAGTCTAATGAAAGCTATATCAAATCAGCTACTTTTTTGTCCGAAAAGTTTGAAGTGGGACCCGGAAAAGTTGTAGTGAAAACATTATTGGATATTGACTTTCCAAAGGGTCACATTGGGGTCAAGAGTTTTGATGTTGAAGTGGTTGATGAAGATGGTAAATCTGTACCTTTGTATGAAACTTACCTTCATCATTGGTTTGCTGTAAAATATATTGAAAATATTACCATGTCACACTACATTAAACAAACTCACGACCTTCGCAACGGTATCGAATTTGAAAGAAATGAGGGTATGTGCCAAGGTTTTTTGCTTCCACATTATTGGGGCTTGGGAGGAGAATCACGAGGAACATCCTCAAATCTTCCAGATCCTTTTGCAGTTGAATTAGGTAATCCTACAAAATTAAAGGATGGGTTTAAAGAAAAATGGTTATTTAGCATCATGGTTATTGATACCCGTGGAACACATGATAGAAAAGGTTGTTCAGAGTGTAGGTGTAAGCTTTTAAATCTCCCAAACAACTTTTACAATGTCACAGTGGGCATTAATGGTCAATTATTGCCAAGAAATTATAAAGAAGGACTCTTTTGTTGTCAAGATAACTTACAATGCAAATTAAGAAATGATTTCCATGGACCAACAAGAAATCTTTCCCTAAGATATAAAATAAGGTGGGTTGATTGGGATGAACACCAAGTGCCTCTTAGGTTCTATATACTTGATTCAACTGATCGTGTAAGATCAAATGGTTTTACACCAATTCATGATTGTCAGGCAGAATACACTATTCCAAGAAATCATTACAGTGACTTACCTCATGTTAAGAAAGCAAACATCCCAATGACAAAAGGTGGCTATCTTATATATGGCACTGCTCATATGCACACCGGCGTTATCAATACTACTTTATATGGACAGGATGGAAGAGTTTTGTGCACTTCAAATCCAAAGTACGGAACAGGAAAAGAAGCAGGAAATGAAAATGGTTACCTAATTGGAATGTCAGTTTGTTATCCAAAGCCTGGTTCTATCAAGATTAAAGACGGTGAAATTCTAACATTAGAATCCATATACGAAAACAAGTTTCGTACTGGGGCTATGGGCCATTTCTATATTTACTTGGCAGATCAAATACCAAACAAAGATTTTACAATTTGA 1200 0.36 MMLFPSTTHSIVVESNESYIKSATFLSEKFEVGPGKVVVKTLLDIDFPKGHIGVKSFDVEVVDEDGKSVPLYETYLHHWFAVKYIENITMSHYIKQTHDLRNGIEFERNEGMCQGFLLPHYWGLGGESRGTSSNLPDPFAVELGNPTKLKDGFKEKWLFSIMVIDTRGTHDRKGCSECRCKLLNLPNNFYNVTVGINGQLLPRNYKEGLFCCQDNLQCKLRNDFHGPTRNLSLRYKIRWVDWDEHQVPLRFYILDSTDRVRSNGFTPIHDCQAEYTIPRNHYSDLPHVKKANIPMTKGGYLIYGTAHMHTGVINTTLYGQDGRVLCTSNPKYGTGKEAGNENGYLIGMSVCYPKPGSIKIKDGEILTLESIYENKFRTGAMGHFYIYLADQIPNKDFTI* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0189 399 Pfam Stress up-regulated Nod 19 20 391 IPR011692 -
Pvu10g0189 399 PANTHER STRESS UP-REGULATED NOD 19 PROTEIN 2 394 IPR011692 -
Pvu10g0189 399 PANTHER STRESS UP-REGULATED NOD 19-RELATED 2 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0189 Pvu-Chr10 2816208 2817733 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0189 - - pvu:PHAVU_011G142100g 726.087