Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0183 ATGTCAACCAAGTTTGGAAGATTGGTCTCTTTGGTTTGCAATAGAGGATTTTCCACCTCGTCCAGTGTTCAAAAGGGTGGTTCTGAGCAAGGTGTGAAATCATTGAACCTCTGTTCTGCAATTAATCAGGCTCTGCACATTGCCTTGGACTCTGATCCCCGTTCTTATGTGTTTGGAGAGGATGTAAGCTTTGGTGGTGTGTTCCGCTGCACAACTGGATTAGCAGACCAATTTGGTAAAAAGAGGATTTTCAATACTCCTCTCTGTGAGCAGGGTATTGTTGGCTTTGGCATTGGTCTAGCAGCAATGGGAAATCGAGCCATAGCAGAAATCCAGTTTGCAGATTACATTTTCCCTGCTTTTGACCAGATTGTCAATGAAGCTGCTAAATTCAGATACCGGAGTGGGAACCAATTTAATTGTGGTGGTTTAACAATTAGAACCCCTTATGGAGCTGTGGGCCATGGTGGGCATTACCACTCTCAGTCCCCTGAGGCTTTTTTCTGCCATGTCCCTGGTATCAAAGTGGTCATCCCCAGAAGTCCACGACAAGCAAAAGGGTTGTTGCTATCTTGCATTCGAGATCCAAATCCTATAGTATTTTTTGAACCGAAGTGGCTTTATCGTTTGGCTGTAGAAGAAGTACCGGAGGATGATTACATGCTGCCTTTATCTGAGGCTGAGGTAATTCGGCAAGGAAGCGATATAACACTTGTTGGATGGGGGGCTCAATTGTCTATAATGGAACAAGCTTGTCTTGATGCTGAAAAA 771 0.4436 MSTKFGRLVSLVCNRGFSTSSSVQKGGSEQGVKSLNLCSAINQALHIALDSDPRSYVFGEDVSFGGVFRCTTGLADQFGKKRIFNTPLCEQGIVGFGIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTIRTPYGAVGHGGHYHSQSPEAFFCHVPGIKVVIPRSPRQAKGLLLSCIRDPNPIVFFEPKWLYRLAVEEVPEDDYMLPLSEAEVIRQGSDITLVGWGAQLSIMEQACLDAEK 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0183 257 Gene3D - 224 256 IPR009014 GO:0003824
Pvu10g0183 257 SMART Transket_pyr_3 35 210 IPR005475 -
Pvu10g0183 257 CDD TPP_PYR_E1-PDHc-beta_like 40 205 - -
Pvu10g0183 257 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 34 235 IPR029061 -
Pvu10g0183 257 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT BETA-RELATED 16 257 - -
Pvu10g0183 257 Pfam Transketolase, pyrimidine binding domain 36 209 IPR005475 -
Pvu10g0183 257 Gene3D - 32 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0183 Pvu-Chr10 2784028 2788300 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0183 18 257 Acyl Lipid Metabolism Gene Families AT1G55510 87.083 1.17e-158 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0183 K00167 - gmx:100802853 503.827