Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0182 GAGGGAATTTCTTGTGAATTGATTGATCTGAAGACACTAATTCCTTGGGATAAGGAAACAGTAGAAGCCTCAGTAAATAAGACAGGAAGATTGCTCGTTAGTCATGAGGCTCCTATAACTGGAGGTTTTGGTGCTGAAGTCTCAGCTTCCATTGTTGAGCGTTGCTTCTCAAGGTTAGAGGCCCCTGTAGCAAGAATTTGTGGTCTGGACACTCCTTTTCCTTTGGTTTTTGAGCCTTTCTACGTGCCAACAAAAAATAAGATATTGGATGCAATAAAATCAACTGTGAAGTACTAA 297 0.4074 EGISCELIDLKTLIPWDKETVEASVNKTGRLLVSHEAPITGGFGAEVSASIVERCFSRLEAPVARICGLDTPFPLVFEPFYVPTKNKILDAIKSTVKY* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0182 98 Pfam Transketolase, C-terminal domain 1 88 IPR033248 -
Pvu10g0182 98 SUPERFAMILY TK C-terminal domain-like 1 98 IPR009014 GO:0003824
Pvu10g0182 98 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT BETA-RELATED 1 98 - -
Pvu10g0182 98 Gene3D - 1 94 IPR009014 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0182 Pvu-Chr10 2781686 2783047 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0182 1 98 Acyl Lipid Metabolism Gene Families AT1G55510 86.735 7.28e-60 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0182 K00167 - pvu:PHAVU_010G0177001 199.519