Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0181 ATGCATTCCTTCTCTCGGCTCAGCATCTTTTGTCTCTTCATTTCACTCTCTCCTCTTTTCTCTTCCTCTGCCTTGCTGTTTCAGGGATTCAACTGGGAATCAAGTAAGAAAGGGGGTTGGTACAACTCGCTGAAGAACTCGGTTCCTGACATTGCAAATGCAGGAATTACTCATGTGTGGCTCCCTCCTCCCTCTCAATCTGTTTCTCCTGAAGGGTATCTTCCAGGAAGGCTATATGATCTTGATGCATCAAGGTATGGATCCAAGGATGAACTGAAGTCCCTAATTGCTGCTTTTCATGAGAAGGGGATCAAGTGCCTGGCTGACATAGTGATCAACCACAGAACTGCAGAGAGGAAAGATGGAAGAGGAATATATTGTATCTTTGAAGGTGGTACTCCAGATGCACGCCTTGATTGGGGTCCATCTTTCATTTGCAAAGATGACACTACTTATTCTGATGGCACTGGAAACAATGACAGTGGAGAGAGCTATGATGCTGCACCTGACATTGACCATCTCAATCCGCAGGTGCAAAGAGAGTTGTCTGAATGGATGAATTGGCTCAAAACTGAGGTTGGTTTTGATGGATGGAGGTTTGATTTTGTGAAGGGCTATGCCCCTAGCATTTCCAAGATCTATATGGAACAAACTAGGCCAGATTTTGCAGTAGGAGAGAAATGGGATCCTCTCTCATATGAGAATGGGAAGCCTACCTATAACCAAGATAGCCATCGTGGGGCACTGGTGAATTGGGTTGAATCTGCAGGTGGGGCTATTACTGCCTTTGATTTCACAACCAAAGGAATTCTTCAAGCTGCTGTGCAAGGGGAGCTGTGGAGGTTGATTGATCCAAATGGCAAGCCTTCTGGAATGATTGGTGTGAAACCAGAAAATGCAGTTACCTTTATTGACAACCATGACACTGGTTCCACACAGAGACTTTGGCCATTCCCTTCTGACAAAGTCATGCAAGGATATGCCTACATTCTAACACACCCTGGCACCCCCTCAATATTCTACGACCATTTCTTTGATTGGGGTTTGAAGGAACAGATTGCCAAATTGAGTAGCATAAGGGTGAGGAATGGGATCAATGAGAAAAGCACTGTGGAAATTATGGCAGCTGAAGGTGACCTTTATGTTGCAAAGATAGACAACAAGATCATGGTGAAGATAGGGCCAAAGATGGACCTTGGAAAACTTATTCCCTCAAATTTCCATGTTGCTACCTCTGGCCAAGACTATGCCGTGTGGGAGTGA 1263 0.4497 MHSFSRLSIFCLFISLSPLFSSSALLFQGFNWESSKKGGWYNSLKNSVPDIANAGITHVWLPPPSQSVSPEGYLPGRLYDLDASRYGSKDELKSLIAAFHEKGIKCLADIVINHRTAERKDGRGIYCIFEGGTPDARLDWGPSFICKDDTTYSDGTGNNDSGESYDAAPDIDHLNPQVQRELSEWMNWLKTEVGFDGWRFDFVKGYAPSISKIYMEQTRPDFAVGEKWDPLSYENGKPTYNQDSHRGALVNWVESAGGAITAFDFTTKGILQAAVQGELWRLIDPNGKPSGMIGVKPENAVTFIDNHDTGSTQRLWPFPSDKVMQGYAYILTHPGTPSIFYDHFFDWGLKEQIAKLSSIRVRNGINEKSTVEIMAAEGDLYVAKIDNKIMVKIGPKMDLGKLIPSNFHVATSGQDYAVWE* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0181 420 SUPERFAMILY (Trans)glycosidases 26 356 IPR017853 -
Pvu10g0181 420 PANTHER ALPHA-AMYLASE 1 1 420 - -
Pvu10g0181 420 Gene3D Glycosidases 25 364 - -
Pvu10g0181 420 Pfam Alpha amylase, catalytic domain 51 207 IPR006047 GO:0005975
Pvu10g0181 420 SMART aamy 24 360 IPR006047 GO:0005975
Pvu10g0181 420 Gene3D - 365 420 IPR013780 -
Pvu10g0181 420 SMART alpha-amyl_c2 361 420 IPR012850 GO:0004556|GO:0005509|GO:0005975
Pvu10g0181 420 Pfam Alpha-amylase C-terminal beta-sheet domain 362 420 IPR012850 GO:0004556|GO:0005509|GO:0005975
Pvu10g0181 420 PRINTS Alpha-amylase signature 103 114 IPR006046 GO:0004556|GO:0005975|GO:0043169
Pvu10g0181 420 PRINTS Alpha-amylase signature 195 206 IPR006046 GO:0004556|GO:0005975|GO:0043169
Pvu10g0181 420 PRINTS Alpha-amylase signature 298 310 IPR006046 GO:0004556|GO:0005975|GO:0043169
Pvu10g0181 420 SUPERFAMILY Glycosyl hydrolase domain 365 420 - -
Pvu10g0181 420 PIRSF Alpha-amylase_plant 1 420 IPR013775 GO:0004556|GO:0005509|GO:0005975
Pvu10g0181 420 PANTHER ALPHA-AMYLASE 1 420 - -
Pvu10g0181 420 CDD AmyAc_arch_bac_plant_AmyA 26 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0181 Pvu-Chr10 2778387 2780941 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0181 4 420 Glycoside Hydrolase AT4G25000 66.983 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0181 K01176 - gmx:100815664 768.074