Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0180 ATGATTAGCCAATTCTCCTTTTCTTATATGATTAACATGAAGACTCTCTCTAAAGTAGCAATAATTCTATCATCAATGATGATGTTGCTTCCTAGCACAACACACTCAATTGTTGTAGAGTCTAACGAAAGCTATATCAAATCAGCTACTTTTTTGTCTGAAAAGTTTGAAGTGGGACCAGGAAAAGTTGTAGTGAAAACATTATTAGATATTGAATTTCCAAAGGGTCACATTGGGGTCAAGAGTTTTGATGTTGAAGTAGTTGATGAAGATGGTAAATCTGTACCTTTGTATGAAACCTACCTTCATCATTGGTTTGCTGTAAAATATATTGAAAATATTACCATGTCAAACTACATTAAACAATCTCACGACCTTCGCAACGGTCTCGAATTCGAAAGAAATGATGGTATGTGCCAAGGTTTTTTGCTTCCACATTATTGGGGCTTGGGAGGAGAATCACGAGGAACATCCTCAAATCTTCCAGATCCTTTTGCAGTTGAATTAGGTAATCCTACAAAATTAAAGGATGGGTTTAAAGAAAAATGGTTATTTAGCATCATGGTTATTGATACCCGTGGCGCACATGATAGAAAAGGTTGTTCAGAGTGTAGGTGTAAGCTTTTAAATCTCCCAAACAACTTTTACAATGTCACCGTGGGCATTAATGGTCAATTATTGCCAAGAAATTATAAAGGAGGACTCTTTTGTTGTCAAGATAACTTACAATGCAAATTAAGAAATGATTTCCATGGCCCGACAAGAAATCTTTCCCTAAGATACAAAATAAGGTGGGTTGATTGGGATGAACACCAGGTGCCTCTTAGGTTCTATATACTTGATTCAACTGATCGTGTAAGATCAAATGGTTCTACACCAATTCATGATTGTCAGGCAGAATATACTATTCCAAGAAATCATGACAATGACTCTCCTCACGTTAAGAAAGCAAACATCCCAATGACAAAAGGTGGTTATCTTGTATATGGCACTGCTCATATGCACACCGGTGTTGTCAATACTACTTTATATGGACAGGATGGAAGGGTTTTATGCACTTCAAATCCAAAATATGGAACAGGAAAAGAAGCAGGAAATGAAAAGGGTTACCTAGTTGGAATGTCAGTTTGCTATCCAAAACCTGGTTCCATCAAGATTAAAGACGGCGAAATTCTAACATTAGAATCCATATACGAAAACAAGTTTCGTACTGGAGCTATGGGGCACTTCTATATTTACTTGGCAGATCAAATACCGAACAATGATTTGAATATTTGA 1278 0.3646 MISQFSFSYMINMKTLSKVAIILSSMMMLLPSTTHSIVVESNESYIKSATFLSEKFEVGPGKVVVKTLLDIEFPKGHIGVKSFDVEVVDEDGKSVPLYETYLHHWFAVKYIENITMSNYIKQSHDLRNGLEFERNDGMCQGFLLPHYWGLGGESRGTSSNLPDPFAVELGNPTKLKDGFKEKWLFSIMVIDTRGAHDRKGCSECRCKLLNLPNNFYNVTVGINGQLLPRNYKGGLFCCQDNLQCKLRNDFHGPTRNLSLRYKIRWVDWDEHQVPLRFYILDSTDRVRSNGSTPIHDCQAEYTIPRNHDNDSPHVKKANIPMTKGGYLVYGTAHMHTGVVNTTLYGQDGRVLCTSNPKYGTGKEAGNEKGYLVGMSVCYPKPGSIKIKDGEILTLESIYENKFRTGAMGHFYIYLADQIPNNDLNI* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0180 425 Pfam Stress up-regulated Nod 19 46 417 IPR011692 -
Pvu10g0180 425 PANTHER STRESS UP-REGULATED NOD 19-RELATED 16 420 - -
Pvu10g0180 425 PANTHER STRESS UP-REGULATED NOD 19 PROTEIN 16 420 IPR011692 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0180 Pvu-Chr10 2761552 2763274 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0180 - - pvu:PHAVU_011G142100g 747.658