Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0170 ATGATGAAGCGCCTGTTGGGTGGGCCCGGAACGATAAGCGGGTTCCTCTTGAGGTTTGGGCAATGTGCGTTTGGTGCCGCTTCGATTACTCTTATGGTCACTGGTTATGGCTTCTCTAGCTACACTGCTTTCTGCTATTTAATTGCATCAATGGGACTTCAATTTCTCTGGAGCTTTGGACTTGCATGTCTTGATATTTATGCCTTGAGGAGAAAGAGAGATCTGCAAAATCCAATTCTTGTCAGCCTGTTTGTTGTAGGTGATTGGGTAACAGCAACTTTATCACTGGCAGCTGCATGCTCATCTGCAGGAGTTGTAGTATTATACTCAAGAGACCTTAATATGTGTGCAACTACTAAGCGCCTCACATGCGGCAAGTATCAGGTTTCTGTAGCCATGGCTTTTGTCACCTGGGTTCTTACAGCAATGTCATCGCATGTGATGTTCTGGATCTTGGCCTCAGTCTAG 468 0.4573 MMKRLLGGPGTISGFLLRFGQCAFGAASITLMVTGYGFSSYTAFCYLIASMGLQFLWSFGLACLDIYALRRKRDLQNPILVSLFVVGDWVTATLSLAAACSSAGVVVLYSRDLNMCATTKRLTCGKYQVSVAMAFVTWVLTAMSSHVMFWILASV* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0170 155 PANTHER CASP-LIKE PROTEIN 5B3 2 155 IPR045009 -
Pvu10g0170 155 Pfam Casparian strip membrane protein domain 9 140 IPR006702 -
Pvu10g0170 155 PANTHER CASP-LIKE PROTEIN 5B2 2 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0170 Pvu-Chr10 2642845 2647899 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0170 - - gmx:100793181 278.87