Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0165 ATGGCAGCCTCAGTGCCAACCGTTGGAGCCGTTAACATGGCACAGTTGAAACTGAATGGCTCTAGCAGAGGAGTGACAAGCTCTGCATTCTTTGGAACCTGTTTGAAGAAAATCAGCTCTGTGAATTCTAGCCAGAAGAGTGTGTGTGGGAATTTCAAGGTTTCTGCACAGATTGAATATGATGAGGAGAAGCAGACTTCAAAGGATAGATGGGGGGGACTTGCTTATGACACTTCCGATGACCAGCAGGATATCACTAGAGGGAAGGGAATGGTGGACACTCTCTTCCAAGCTCCCATGGAGAGTGGCACTCACTATGCTGTCATGAGTTCCTATGATTACATCAGTGCTGGTCTTCGCCAGTACAATTTGGACAACACCATGGATGGCTTCTATATTGCTCCTGCCTTTATGGATAAGATTGTTGTTCACATCACCAAGAACTTTTTGTCCTTGCCAAATATTAAGGTTCCTCTTATTTTGGGTATTTGGGGAGGCAAAGGTCAGGGGAAATCATTCCAATGTGAGCTTGTCTTTGCCAAGATGGGAATCAACCCCATAATGATGAGTGCTGGAGAATTGGAGAGTGGAAATGCTGGAGAGCCTGCAAAGTTGATTAGGCAAAGGTACCGTGAGGCAGCAGACATTATCAGAAAAGGAAAGATGTGCTGTCTCTTCATCAATGATCTTGATGCTGGAGCTGGTAGGCTTGGTGGAACCACACAATACACAGTCAACAACCAGATGGTGAATGCAACCCTCATGAACATTGCTGACAACCCAACCAATGTCCAACTTCCTGGCATGTACAACAAGGAGGAGAATCCCCGTGTTCCAATCATTGTCACTGGCAATGACTTCTCAACATTGTATGCTCCTCTCATTCGTGATGGACGTATGGAGAAATTCTATTGGGCACCTACTCGAGATGACAGAATTGGTGTGTGCCAAGGCATTTTCAGAACAGATGGTATTCCAAAGGAGGACATTATCAAGCTTGTTGACACTTTCCCTGGACAATCTATTGACTTTTTTGGTGCCTTGAGGGCCAGAGTGTATGATGATGAAGTCAGAAAGTGGATTTCTGGTGTGGGGGTGGAGAATGTTGGGAAAAAGCTAGTGAATTCAAAGGAGGGACCTCCAACTTTTGAGCAACCACAGATGTCTCTTAGCAAGCTCCTTGAGTATGGAAACATGCTTGTCCAAGAGCAAGAGAATGTGAAGAGAGTTCAATTGGCTGACAAATACCTCAGTGAGGCTGCACTTGGAGATGCAAATGAAGATGCCATGAACACAGGAAACTTCTATGGACAAGCAGCTCAGCAAGTTCATGTTCCTGTTCCTGAAGGTTGCACTGACCCTGCTGCAGAAAACTATGATCCAACAGCCAGAAGTGATGATGGAAGTTGCACATACACACTTTAG 1425 0.4533 MAASVPTVGAVNMAQLKLNGSSRGVTSSAFFGTCLKKISSVNSSQKSVCGNFKVSAQIEYDEEKQTSKDRWGGLAYDTSDDQQDITRGKGMVDTLFQAPMESGTHYAVMSSYDYISAGLRQYNLDNTMDGFYIAPAFMDKIVVHITKNFLSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCQGIFRTDGIPKEDIIKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVENVGKKLVNSKEGPPTFEQPQMSLSKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANEDAMNTGNFYGQAAQQVHVPVPEGCTDPAAENYDPTARSDDGSCTYTL* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0165 474 PANTHER - 1 472 IPR044960 -
Pvu10g0165 474 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 128 332 IPR027417 -
Pvu10g0165 474 MobiDBLite consensus disorder prediction 451 474 - -
Pvu10g0165 474 Gene3D - 123 307 IPR027417 -
Pvu10g0165 474 Pfam ATPase family associated with various cellular activities (AAA) 163 304 IPR003959 GO:0005524|GO:0016887
Pvu10g0165 474 PANTHER RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE, CHLOROPLASTIC-LIKE ISOFORM X1 1 472 - -
Pvu10g0165 474 Gene3D - 308 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0165 Pvu-Chr10 2545335 2548462 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0165 - - gmx:100795298 909.057