Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0142 ATGGCGGACTTGCCGGAAGATTGCCGGAACTCTTCTCACAGTTCAAAGGATCCCGAAAACCGCAAGGACGTGGAGGAGAGTGTGCACTCTGCTGCCAATGGTACAGAGAGCTCTTCAGCCTCAGACATTCCTGGCAAGGCGTTGTCTAAAGTGGCCACGATGCCAATAGACATATCACATGGAGATAAATTAGAGTCAAGTTCAAGTAAGTTTAGGATTGAAAGGTCAAAGACAGAGAGGATTAGACACTTGAGTCCTGAAGATGCAGCTCAAATTTTTGATAACAAAATTCCTGTCCAGGAGAAGCTTAAATTGTTGAACAGAATAGCTACTGTCAAGGATGATGGAACTGTAGAATTTGAAGTTCCTGTAGATGTTGAACCTGAGACAATTGTTGCTCAATCCAAAGAAGTAAATCATGTTGTTGATGATTCACATGATGCAACAGACTTTCATTACATCCCACCATTGAATATAGTCATGCTTATAGTTGGTACACGAGGAGATGTGCAACCATTTATTGCAATAGGCAAACGCTTGCAGGACTATGGCCACCGAGTTAGATTAGCAACCCATTCAAATTTTAAGGAGTTTGTTTTGACAGCTGGGTTGGAGTTTTATCCATTAGGTGGTGATCCAAAAGTTCTGGCTGGTTATATGGTTAAAAACAAGGGCTTTCTGCCATCGGGACCTTCCGAGATACCTATTCAGCGAAATCAAATGAAAGAAATCATTAATTCTCTGCTTCCTGCTTGTAAAGAACCTGATATTGATTCTGGTGTCCCCTTTAAAGCAGAAGCAATCATTGCCAATCCCCCTGCATATGGGCATACCCATGTGGCAGAGGCACTTAACATTCCAATTCATATTTTTTTCACAATGCCATGGACGCCAACTACTGAATTTCCACATCCTCTGTCACGTGTAAAGCAACAGGCTGGTTACAGGCTTTCATATCAAATAGTTGACTCTTTAATTTGGCTTGGAATACGGGACATGATTAATGATCTTAGGAAGAAAAAGTTGAAGCTACGACCAGTCACATATTTAAGTGGCTCACAAGGCTCTGAGACTGAGATTCCACATGCATATATATGGAGTCCACATCTTGTTCCTAAACCAAAAGATTGGGGACCCAAAATTGATGTAGTAGGATTTTGCTTTCTTGATCTTGCGTCAAACTATGAACCACCCGAGTCCCTTGTAAAATGGCTTGGAGATGGTGACAATCCTATTTACATTGGATTTGGTAGCTTGCCTGTTCAAGAACCAAAAAAGATGACACAAGTAATTGTAGATGCATTGGAGTCCACTGGACAGAGAGGCATAATCAATAAAGGATGGGGAGGTCTTGGGAATTTGGCAGAACCAAAGGACTCAATATACTTATTGGATAATTGCCCTCATGATTGGCTTTTCTTGCATTGCAAGGCAGTGGTTCATCACGGGGGTGCTGGAACAACAGCTGCAGGGCTTAAAGCTGCTTGCCCAACAACGATAGTTCCTTTTTTTGGTGATCAACCATTTTGGGGTGATAGAGTACATGCCAGAGGAGTTGGTCCTCCACCTATCCCAGTTGATGAGTTTTCGCTTCCCAAGTTGGTTGGTGCAATAAAATTTATGCTAGATCCTAAGGTAAAGAAACGTGCAATTGATCTTGCTAAGGCCATGGAAAGTGAGGATGGAGTGGCAGGAGCGGTGAAGGCATTTTTTAAGCAGCTTCCTCAAAAGAAACCAGAAGCTGATGCAGATCCGCAACCATCTAGTTTTTTTTCTTTTAGAAGATGTTTTGGTTGTTCCTGA 1803 0.4221 MADLPEDCRNSSHSSKDPENRKDVEESVHSAANGTESSSASDIPGKALSKVATMPIDISHGDKLESSSSKFRIERSKTERIRHLSPEDAAQIFDNKIPVQEKLKLLNRIATVKDDGTVEFEVPVDVEPETIVAQSKEVNHVVDDSHDATDFHYIPPLNIVMLIVGTRGDVQPFIAIGKRLQDYGHRVRLATHSNFKEFVLTAGLEFYPLGGDPKVLAGYMVKNKGFLPSGPSEIPIQRNQMKEIINSLLPACKEPDIDSGVPFKAEAIIANPPAYGHTHVAEALNIPIHIFFTMPWTPTTEFPHPLSRVKQQAGYRLSYQIVDSLIWLGIRDMINDLRKKKLKLRPVTYLSGSQGSETEIPHAYIWSPHLVPKPKDWGPKIDVVGFCFLDLASNYEPPESLVKWLGDGDNPIYIGFGSLPVQEPKKMTQVIVDALESTGQRGIINKGWGGLGNLAEPKDSIYLLDNCPHDWLFLHCKAVVHHGGAGTTAAGLKAACPTTIVPFFGDQPFWGDRVHARGVGPPPIPVDEFSLPKLVGAIKFMLDPKVKKRAIDLAKAMESEDGVAGAVKAFFKQLPQKKPEADADPQPSSFFSFRRCFGCS* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0142 600 CDD GT1_Gtf-like 157 572 IPR002213 GO:0008194
Pvu10g0142 600 MobiDBLite consensus disorder prediction 1 46 - -
Pvu10g0142 600 Pfam Glycosyltransferase family 28 N-terminal domain 159 302 IPR004276 GO:0005975|GO:0016758|GO:0030259
Pvu10g0142 600 MobiDBLite consensus disorder prediction 9 29 - -
Pvu10g0142 600 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 412 551 IPR002213 GO:0008194
Pvu10g0142 600 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 158 570 - -
Pvu10g0142 600 Gene3D Glycogen Phosphorylase B; 388 557 - -
Pvu10g0142 600 Gene3D Glycogen Phosphorylase B; 159 562 - -
Pvu10g0142 600 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE 31 600 - -
Pvu10g0142 600 MobiDBLite consensus disorder prediction 30 44 - -
Pvu10g0142 600 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE UGT80A2-LIKE ISOFORM X1 31 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0142 Pvu-Chr10 2189340 2223559 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0142 72 600 Glycosyltransferase AT3G07020 79.626 0.0 875
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0142 K05841 - gmx:100812490 1058.9