Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0136 ATGTGGAAGCTGAAGGTCGCAGAGGGAGAGAGTCCATGGCTTCGAACACGCAACAATCACCTTGGAAGACAGGTCTGGGAGTTCGATCCGACGCCTCAGCCACCGCAACAACTCCTCCAAATCGAAAACGCTCGCCACAGTTTCCACCATAACCGCTCCACTCAGAAACAGAGCGCCGATTTACTTTTGCGCATGCAGTTTGCGGAAGAGAACCCGATGCACGAAGTCTTGCCCAAAGTGGAAGTTGAAGGCACCGAGGATGTAACTGAAGAGGTCGTGACGAGAACGTTACGAAGAGCAACGAGTTTCCTTTCAACTCTTCAGAGTCACGATGGACACTGGCCAGGTGATTATGGAGGTCCCATGTTCATGATTCCTTCTCTGATAATTGCTCTGTATATCAGCGGGGCGGTGAATTCAGTCTTAACAGAAGAGCACAGAAAGGAAATTCGGCGTTTCATCTATAATCATCAAAACGAGGATGGTGGGTGGGGTTTGCATATTGAAGGTTCAAGCACAATGTTTGGCTCTGTTCTGACTTATGTTGCTCTGAGACTGCTTGGTGAGGGAGCAAGTGGAGCACAAAGGGAAATGACGATTGCACGTGACTGGATTCAAAGGCATGGTGGAGCCACTTTTATAACATCGTGGGGGAAGATGTGGCTTTCAGTCCTTGGAGTGTATGAATGGTCAGGAAATAATCCTTTACCCCCTGAAGTATGGCTCCTTCCATACATGCTTCCATTTCATCCAGGAAGGATGTGGAATCACTGCAGGATGGTGTATTTGCCAATGTCGTACTTATATGCGAAGAGATTTGTTGGTTCAATCACGCCTATGGTTTTGTCTTTGAGAAAAGAGCTTTATACCATACCTTATGCGGATATAGACTGGGATCAGGCTCGTAATTTGTGTGCAAAGGAAGACTTGTACTATCCTCACTCACATGTGCAGGATATTCTCTGGGGAACTCTACACAACATCATTGAGCCTATTTTGATGCATTTTCCAGGCAATAAGTTGAGAGAAAAGGCTCTTAGGAATGTAATGGAGCGTATACATTATGAAGATGAGACTAGTCATTATATTTGCTTAGGTCCTGTAAACAAGGTGTTAAATATGCTGTGTTGTTGGGTGGAAGATCCAAATTCTGAGGCATTCAAGTTACATCTTCCAAGGATTCATGATTATCTATGGATTGCTGAAGATGGTCTCAAAATGAAGGGATACAATGGAAGTCAACTATGGGATACTGCATTTATTGTCCAAGCAATTATTTCAACTAACCTAGCAGAAGAATACGGTCCAACTCTAAGAAAAGCTCATACATACATCAAGAATTCACAGATTTTAGAAGATTGTCCGGGTGATCTAAATAAATGGTTTCGTCACATTTCAAAAGGCAGTTGGCCATTTTCGACCGTAGATAATGGGTGGCCCATTTCTGATTGCACCGCTGAAGGACTAAAAGCTGTTCTCTTACTCTCCAAGATGGCACCAGAGATTGTTGGTGAGCCGTTGGATGCAAATCGATTATATGATGCAGTAAATATCCTTCTCTCATTACAGAATAAAGATGGAGGCTTTCCAACGTATGAGCTCACACGATCTTATAGCTGGATGGAGATAATCAATCCCTCTGAAACATTTGGCGACATAATTCTCGATTATCCTTACGTGGAATGCACCTCTGCATCGATTGAAGCTTTGACATTATTTAGGAAATTGTATCCTGAACATCGTCCACAGGAAATACAAGGCTGTGTTGAGAAAGCTGTTGCCTTTATTCAGAAAACACAGTCATCAGACGGCTCATGGTATGGTTCATGGGGAATTTGCTTCACTTATGGAACATGGTTTGGAGTAAAAGGGTTGGTAAGCAGTGGAAGGAGTTTCAGTGATTGCTCAAACATCAGAAAAGCTTCTGAGTTTTTGCTGTCTAAGCAACTCCCTTCTGGTGGCTGGGGAGAGAGTTATCTGTCAAGTCAAAACAAGGTATATACAAATCTTGAAGGCAACAAGCCTCATGTAGTAAACACTGGGTGGGCTATGCTGGCTCTAATAGAAGCTGGACAGGCAGAGAGAGATCCAACACCACTGCACAAAGCTGCTGTGTACTTGATAAATTCACAGATGGAGAATGGTGACTATCCGCAACAGGAAATAATGGGAGTGTTCAACAAGAATTGCATGATCTCATTTGCGGCATACAGAAGCATATTTCCTATATGGGCCTTAGGAGAATACCGACGTCATGTATTTCATGAATAA 2271 0.4342 MWKLKVAEGESPWLRTRNNHLGRQVWEFDPTPQPPQQLLQIENARHSFHHNRSTQKQSADLLLRMQFAEENPMHEVLPKVEVEGTEDVTEEVVTRTLRRATSFLSTLQSHDGHWPGDYGGPMFMIPSLIIALYISGAVNSVLTEEHRKEIRRFIYNHQNEDGGWGLHIEGSSTMFGSVLTYVALRLLGEGASGAQREMTIARDWIQRHGGATFITSWGKMWLSVLGVYEWSGNNPLPPEVWLLPYMLPFHPGRMWNHCRMVYLPMSYLYAKRFVGSITPMVLSLRKELYTIPYADIDWDQARNLCAKEDLYYPHSHVQDILWGTLHNIIEPILMHFPGNKLREKALRNVMERIHYEDETSHYICLGPVNKVLNMLCCWVEDPNSEAFKLHLPRIHDYLWIAEDGLKMKGYNGSQLWDTAFIVQAIISTNLAEEYGPTLRKAHTYIKNSQILEDCPGDLNKWFRHISKGSWPFSTVDNGWPISDCTAEGLKAVLLLSKMAPEIVGEPLDANRLYDAVNILLSLQNKDGGFPTYELTRSYSWMEIINPSETFGDIILDYPYVECTSASIEALTLFRKLYPEHRPQEIQGCVEKAVAFIQKTQSSDGSWYGSWGICFTYGTWFGVKGLVSSGRSFSDCSNIRKASEFLLSKQLPSGGWGESYLSSQNKVYTNLEGNKPHVVNTGWAMLALIEAGQAERDPTPLHKAAVYLINSQMENGDYPQQEIMGVFNKNCMISFAAYRSIFPIWALGEYRRHVFHE* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0136 756 TIGRFAM squalene_cyclas: squalene/oxidosqualene cyclases 96 751 IPR018333 GO:0005811|GO:0016104|GO:0016866
Pvu10g0136 756 Gene3D - 37 224 - -
Pvu10g0136 756 Pfam Squalene-hopene cyclase C-terminal domain 413 751 IPR032696 -
Pvu10g0136 756 ProSitePatterns Terpene synthases signature. 603 617 IPR002365 GO:0016866
Pvu10g0136 756 Pfam Squalene-hopene cyclase N-terminal domain 98 400 IPR032697 -
Pvu10g0136 756 Gene3D - 386 755 - -
Pvu10g0136 756 PANTHER TERPENE CYCLASE/MUTASE FAMILY MEMBER 1 754 - -
Pvu10g0136 756 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 120 407 IPR008930 -
Pvu10g0136 756 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 340 754 IPR008930 -
Pvu10g0136 756 PANTHER TERPENE CYCLASE/MUTASE FAMILY MEMBER 1 754 IPR018333 GO:0005811|GO:0016104|GO:0016866
Pvu10g0136 756 CDD SQCY_1 97 749 IPR018333 GO:0005811|GO:0016104|GO:0016866
Pvu10g0136 756 SFLD Prenyltransferase Like 2 70 752 IPR018333 GO:0005811|GO:0016104|GO:0016866
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0136 Pvu-Chr10 2058548 2074962 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0136 K01853 - gmx:548054 1286.94