Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0124 ATGGACAATTTCTCTGCTTACCTGTCATGCTTTCTCCTCCTCCTCCTTTTTCTCTCAGACGCACGTGCCGACCTCCCCGGCTCCTGGGAGATCCTCGTCTCCGACGCCGGCGTCGCCTCCATGCACACTGCCGTCACGCGCTTCAACACGGTCGTCCTCCTCGACCGGACCAACATCGGCCCCTCAAGAAAACTCCTTCCCAAGGGCCACTGCCGCTACGACCGGAACGATGCCCTCTTAAAGCGCGACTGCTACGCGCACTCCGTCCACCTCGACCTCCAAACCAACCAAGTCCGTCCTTTGAAAATCCTCACCGACACGTGGTGTTCCTCCGGCCAGTTCCTCCCCGACGGCACGCTTTTGCAGACTGGCGGCGACCTCGACGGGCTGAAAAAGATCCGATTGTTCAGCCCGTGTGACGCAACCGGGTTGTGCGACTGGAAAGAGCTGGATGACGTGGAATTGGCGGAAGGTAGATGGTACGCCACTAACCAGATTTTACCGGACGGATCGGTGATTATAATCGGCGGAAGAGGCTCAAACACCGTCGAGTTTTTCCCTCCGCGCAAACACGGTGCCGTTTCATTTCCCTTTTTGGCTGAAACGGAAGACACGCAGATGGATAACTTATACCCTTACGTCCACCTCCTTCCAAACGGTCACCTTTTCGTTTTCGCCAACACCAGGTCGGTGATGTATGATTTCACGCGCCACGTCATCGTCAAGGAGTACCCTCAATTGGAGGGCGGTCCGCGGAACTACCCTTCGGCAGGGTCCTCCGCGATGCTGGCTTTACAAGGGGACTACTCAACGGCGGAGATTGTTGTGTGTGGCGGCGCGCAATACGGTGCGTTTTTGCTGCGGAGTACGGACACCCCGGCGCACGGTAGCTGCGGGCGCATATCAGCTGTGAATGAGAATCCGAAATGGGAAATGGAGAACATGCCGTTCGCGAGAGTAATGGGGGATATGGTGATGCTTCCAAACGGCGACGTTTTGGTTATCAATGGAGCTATGTCTGGGACACAGGGGTTTGAGTCTGCTAGTAATCCCTGTTTGAATCCCGTTCTGTACAGACCGGACCAACCGGTTGGGTTGCGGTTCATGGTTTTGAACCCTGGCACGGTTCCAAGAATGTACCATGCAACGGCCAATTTGTTACCCGACGGAAGGGTTCTTCTTGCCGGAAGTAACCCGCATGTTTTGTACCGGTTCGATGCTGAGTATCCGACCGAGTTACGAGTGGAAGCGTTTTCGCCGGAGTATTTGTCGCCGGACCGGGCCAATCTTAGACCGGTCATTGAGGAGGTGCCCGAAACGGTGCGCTTTGGGGGGAGTTTCGATGTTGTGGTTTCGGTGCCTTTGCCTGTGGTTGGGATTGTGGAAGTGAATTTGGCGAGTGCCCCCTTCTCCACGCACTCGTTTTCGCAGGGTCAACGTTTGGTCAAACTTGCCGTTTCCTCCGCCGTACCGGACGGCGATGGTAGGTACCGGATCGGCGTGACTGCGCCACCGAGTGGGACAGTGGCGCCGCCCGGGTATTACATGGCCTTCGCGGTGAACCAGGGCGTGCCAAGCATTGCAAAGTGGATACACGTGGCGTAG 1605 0.5664 MDNFSAYLSCFLLLLLFLSDARADLPGSWEILVSDAGVASMHTAVTRFNTVVLLDRTNIGPSRKLLPKGHCRYDRNDALLKRDCYAHSVHLDLQTNQVRPLKILTDTWCSSGQFLPDGTLLQTGGDLDGLKKIRLFSPCDATGLCDWKELDDVELAEGRWYATNQILPDGSVIIIGGRGSNTVEFFPPRKHGAVSFPFLAETEDTQMDNLYPYVHLLPNGHLFVFANTRSVMYDFTRHVIVKEYPQLEGGPRNYPSAGSSAMLALQGDYSTAEIVVCGGAQYGAFLLRSTDTPAHGSCGRISAVNENPKWEMENMPFARVMGDMVMLPNGDVLVINGAMSGTQGFESASNPCLNPVLYRPDQPVGLRFMVLNPGTVPRMYHATANLLPDGRVLLAGSNPHVLYRFDAEYPTELRVEAFSPEYLSPDRANLRPVIEEVPETVRFGGSFDVVVSVPLPVVGIVEVNLASAPFSTHSFSQGQRLVKLAVSSAVPDGDGRYRIGVTAPPSGTVAPPGYYMAFAVNQGVPSIAKWIHVA* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0124 534 PANTHER SECRETED PROTEIN-RELATED 9 533 - -
Pvu10g0124 534 Gene3D Immunoglobulins 430 534 IPR013783 -
Pvu10g0124 534 Gene3D - 24 429 IPR037293 -
Pvu10g0124 534 CDD E_set_GO_C 428 533 IPR015202 -
Pvu10g0124 534 Pfam Galactose oxidase-like, Early set domain 431 533 IPR015202 -
Pvu10g0124 534 SUPERFAMILY E set domains 429 533 IPR014756 -
Pvu10g0124 534 SUPERFAMILY Galactose oxidase, central domain 88 425 IPR011043 -
Pvu10g0124 534 Pfam Glyoxal oxidase N-terminus 41 279 IPR009880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0124 Pvu-Chr10 1886240 1888369 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0124 - - gmx:100816888 953.355