Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0120 ATGGCCACAGCCACCTTTCACAAGTGGCTCACTCATTTCACTGACACAAAGAAATGCAGTTTTTCTCCTGCTTCCAAGGGACACCAAACTCTCTACTTCCACCACTACCATAGACATGTGTGTCAAGGATGCTGCTACCTTTCAATGAACGGTTGCAGAGAGGGACATGAGCAGCATGCAAGAACAAGGAAGCCAGTTGGTACCATAGAAACCAGAACATTGGCAGCAGTTGCATCACCTGCAATGGCTATGTACAGTCTGAACATGGCCATTTCAGAGCTGAAATCAGAGGCTCCGTATGGTACCTTGTCGGGCATAGTAAGGGTGCAGGTGCCGATTGAAGAGCAGGTTGAGGCCATCGATTGGCTCCATTCACAAAACCATCTTCTGCTTCCTCGTTGCTTCTTCTCTGGAAGGAAGCACAGTCCCAATGGTGAAGAAAACTTGGTGAGCGTTGCAGGGTTGGGTTCTGCTGTTTTCTTTTCCCAGCCACACCCCTTTTCCTACTGGGATTGGATTTCTATAAGGAGGTTTCTTTCTGAGAGATGCCCTTTAGTCCGTGCATATGGAGCTATCCGTTTCAATGCAGAAGCTAAGGTGTCATCAGAGTGGCTGGCTTTTGGTTCTTTCTACTTCATGATTCCTCAGGTTGAGTTCAATGAGCTTGAAGGAGGATCGATGCTTACCATAACTATTGCTTGGGATAATGATCTTTCTTGGTCATGGGAAAATGCAATCAATGCACTCCAAGAAACACTTTGCAATGTTTCTTCTTCCATTGTGAACTTTCCAAAAAGTACTCCTCCAACATTAATATTAAGCAGCCATAACATTCCTAGTAATGTAGACTGGGATCTTGCCGTTAATAGAGCTTTACAAATGATAGAGCGAAACGACTCCTTATTAACCAAGGTTGTGCTAGCACGTAGCACTAGAGTAGTGCCTACTGCTGATATTGATCCTCTTGCATGGTTATCTTGCTTAAAGGTTGAAGGTGAAAATGCATATCAGTTTTTACTTCAGCCACCAAATGCACCAGCATTCATTGGAAACACACCAGAGCAACTATTTCACAGAAAATGGCTCCACATTACTAGTGAGGCTTTGGCTGGAACCCGTGCTAGAGGAGCATCACAAGCACTAGATCGCCAAATTGAACTTGATTTACTTACTAGTCCAAAGGATGACATTGAGTTCACCATAGTTAGAGACACTGTAAGAAGAAAATTAGAGGCAGTATGTGAAAGGGTTGTGATCAAGCCAGAGAAAATGATAAGAAAACTCCCCAGGATTCAACATTTGTTTGCTCAATTATCTGGCAGGTTGAGAAGCGAAGAAGATGAGTTTGAAATTTTGTCATCTCTTCACCCTAGTCCAGCTGTTTGTGGATTTCCAACAGAAGAGGCACAACTTTTAATTGCAGAAACAGAAGTATTTGATCGAGGGATGTATGCTGGACCAGTTGGTTGGTTTGGAGGAGGAGAGAGTGAATTTGCTGTAGGCATCCGGTCAGCATTGCTGGAAAAGGATAGGGGTGCATTTATATATGCTGGGACAGGGATTGTGGAAGGAAGCAGTCCTTATCTGGAGTGGGATGAGCTAGAACTCAAGACATCTCAGTTCACCAAGTTGCTCAAGCTTGACTTGCCTCAGAGACAAAAAGTAGATTGTAAATGA 1677 0.4389 MATATFHKWLTHFTDTKKCSFSPASKGHQTLYFHHYHRHVCQGCCYLSMNGCREGHEQHARTRKPVGTIETRTLAAVASPAMAMYSLNMAISELKSEAPYGTLSGIVRVQVPIEEQVEAIDWLHSQNHLLLPRCFFSGRKHSPNGEENLVSVAGLGSAVFFSQPHPFSYWDWISIRRFLSERCPLVRAYGAIRFNAEAKVSSEWLAFGSFYFMIPQVEFNELEGGSMLTITIAWDNDLSWSWENAINALQETLCNVSSSIVNFPKSTPPTLILSSHNIPSNVDWDLAVNRALQMIERNDSLLTKVVLARSTRVVPTADIDPLAWLSCLKVEGENAYQFLLQPPNAPAFIGNTPEQLFHRKWLHITSEALAGTRARGASQALDRQIELDLLTSPKDDIEFTIVRDTVRRKLEAVCERVVIKPEKMIRKLPRIQHLFAQLSGRLRSEEDEFEILSSLHPSPAVCGFPTEEAQLLIAETEVFDRGMYAGPVGWFGGGESEFAVGIRSALLEKDRGAFIYAGTGIVEGSSPYLEWDELELKTSQFTKLLKLDLPQRQKVDCK* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0120 558 SUPERFAMILY ADC synthase 113 548 IPR005801 GO:0009058
Pvu10g0120 558 TIGRFAM isochor_syn: isochorismate synthase 187 544 IPR004561 GO:0008909|GO:0009058
Pvu10g0120 558 Pfam chorismate binding enzyme 283 537 IPR015890 -
Pvu10g0120 558 Gene3D Anthranilate synthase 83 547 IPR005801 GO:0009058
Pvu10g0120 558 PANTHER - 39 554 IPR044250 GO:0008909
Pvu10g0120 558 PANTHER ISOCHORISMATE SYNTHASE 2, CHLOROPLASTIC 39 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0120 Pvu-Chr10 1818193 1825666 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0120 K02552 - gmx:100804974 1003.43