Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0115 ATGGAAATGGAGAATGAGAAGAGCATCACACAACAGACTCAGAGGCCAAAATATGATTGTCTTCTATTTGATTTAGATGATACTTTGTATCCTCTCAATTCTGGTCTTGCAAATGCAGTTCACCAAAACATTAAGGACTACATGGTGGAGAAACTTGGCATAGAACCAAGTAAAACTGATGAGATGACCAACCTTCTATACAGCAACTATGGAACTACTCTTTCTGGTCTAAGGGCAATTGGATATGAGTTTGATTATGGAGAATACTACAGTTTTGTTCATGGGAGATTGCCTTATGAGAATTTAAAGCCAGATCCTGTTCTGAGAAATCTCCTACTCAGCCTACCCTATAAGAAGCTTATTTTTACAAACTCAGACAAAGTCCATACCATTAAGGCACTTAGAAAACTTGGATTGGAAGATTGCTTTGAAGGAATCACATGCTTTGAGACCCTCAATCCCATCCACAATGGCACTGAGATCACAGAGGTTGCTGGTTCAAAGGCCACTAATCCAACACCCAAAACTGGTCTAAAATGCTCAGAAATCTTTGACATCATAGAACACTTTGCTCAACCAGATCCCACTACAGTCCTTCCAAGCTCACCAGTTATCTGCAAACCATCAGAACATGCCATTGAATTGGCTCTCAAGATAGCCAACCTTAATCCCAAAAGAACATTGTTCTTTGAGGATAGTGTCCGCAACATAGAAGCTGGAAAACGAGTGGGTCTTCACACTGTGCTGGTTGGTAAATCCCACAGAGTTAAAGGTGCCGATTATGCCATGGAAAGCATTCACAACCTTAAGGAGGCAGTGCCTGAACTACGGGAGACTGAAATAAAAGCACAAGTTATTGCATACCCTGGGACTGAGAAGCTTGCAATGGAGACATCAGTTGTAGCTTGA 909 0.4136 MEMENEKSITQQTQRPKYDCLLFDLDDTLYPLNSGLANAVHQNIKDYMVEKLGIEPSKTDEMTNLLYSNYGTTLSGLRAIGYEFDYGEYYSFVHGRLPYENLKPDPVLRNLLLSLPYKKLIFTNSDKVHTIKALRKLGLEDCFEGITCFETLNPIHNGTEITEVAGSKATNPTPKTGLKCSEIFDIIEHFAQPDPTTVLPSSPVICKPSEHAIELALKIANLNPKRTLFFEDSVRNIEAGKRVGLHTVLVGKSHRVKGADYAMESIHNLKEAVPELRETEIKAQVIAYPGTEKLAMETSVVA* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0115 302 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 19 250 IPR010237 -
Pvu10g0115 302 Pfam HAD-hyrolase-like 206 254 - -
Pvu10g0115 302 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 3 302 - -
Pvu10g0115 302 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 12 278 - -
Pvu10g0115 302 SFLD C1.5.3: 5'-Nucleotidase Like 12 278 IPR010237 -
Pvu10g0115 302 SUPERFAMILY HAD-like 17 276 IPR036412 -
Pvu10g0115 302 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 3 302 - -
Pvu10g0115 302 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 202 250 IPR006439 -
Pvu10g0115 302 Gene3D - 89 276 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0115 Pvu-Chr10 1727714 1730353 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0115 K07025 K18551 gmx:100819459 496.893