Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0111 ATGAATTGGCTTAGCCGCAGCCTTTCTAGGAGTTCAAGGAATAGCAAAACCCCAAGTACCCAAACACAGTCCAATTCCAAAGTTCAGCATCAACAACAAGAAGAAGAAAGCGTATATGGGATCACCGAGGAACTCATCAACCACGTCAAATCCTTCACCCTTGACAACTTTAAGAATTTCCCTGTCAAAGATGAAGATGAAGGCAGTTATTGGGAGGAAACTGAATCCTCTTCAAGCAAAGTTCGAAAGGATCTCTCCGAGTGGCAAGAGAGACATGCAATCCTCGTTCTCTCAAGAGTCAAGGAAATATCTCAACTGAGATATGTACTGTGTCCACGCCATTTGAAGGAAAATCAATTCTGGAAAATTTACTTTAAGCTTGCCAGGAGCCATGTTCTTGAATACGAGCTTCGCCACATAAAACAAGAGAAACTGAAGCGGATGGCAATGGAAGATGAGAAATCTTCAGTTAACAACTCATATGAAGTTGAAATGTCAGAGGCAAAGGATTTCAACTTTATTGAGCCTCTACCACCCTCAGAATGA 546 0.4176 MNWLSRSLSRSSRNSKTPSTQTQSNSKVQHQQQEEESVYGITEELINHVKSFTLDNFKNFPVKDEDEGSYWEETESSSSKVRKDLSEWQERHAILVLSRVKEISQLRYVLCPRHLKENQFWKIYFKLARSHVLEYELRHIKQEKLKRMAMEDEKSSVNNSYEVEMSEAKDFNFIEPLPPSE* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0111 181 SUPERFAMILY BSD domain-like 40 137 IPR035925 -
Pvu10g0111 181 Gene3D BSD domain 48 148 IPR035925 -
Pvu10g0111 181 Pfam BSD domain 85 136 IPR005607 -
Pvu10g0111 181 PANTHER OS04G0662000 PROTEIN 2 172 - -
Pvu10g0111 181 SMART wurzfinal6 80 132 IPR005607 -
Pvu10g0111 181 ProSiteProfiles BSD domain profile. 73 132 IPR005607 -
Pvu10g0111 181 PANTHER BSD DOMAIN-CONTAINING PROTEIN 2 172 - -
Pvu10g0111 181 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0111 Pvu-Chr10 1672104 1678851 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0111 39 142 EF-hand Containing Proteins AT1G69030 52.885 2.71e-33 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0111 - - gmx:100805729 277.715