Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0100 ATGCATGCTTTTCTGATTCAACAGGGCCTCCTTGAAGCTTTGGAAGAAGAATCCAAGCTTCACAGAACCATGGCTGAGAAGGACAGGACTGCGCTATTGGAGAAGGCTCATAGTGCAATTGTTTTCAGTCTTGATGACAAGGTGTTAAGGCAAGTTTCGAAGGAGAAGACTACAGCAGGGCTATGGAAGAAGTTGGAAAGCTTGTATATGAAGAAGTCCCTGGTGAACTACTTGAAGTAG 240 0.4458 MHAFLIQQGLLEALEEESKLHRTMAEKDRTALLEKAHSAIVFSLDDKVLRQVSKEKTTAGLWKKLESLYMKKSLVNYLK* 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0100 79 Pfam gag-polypeptide of LTR copia-type 34 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0100 Pvu-Chr10 1517253 1517937 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0100 - - pvu:PHAVU_003G107200g 92.0485