Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0099 ATGCCCGGAGAACCACGCCCCTTGGAGATCCACCTCAGGGTCAACCCCAAGGGAAGCAACACCAACATGGTGCACCCTGTGGCCGTGCAAACTCTCTCCCCGGTTCAGTACCCCAGAGAGGAAGTGAAGCATTACCGCAAGTGGTTCTCTTGGTTGATACCCCTCTTTGTTGTTGCTAACATAGTTTTGTTTGTGATCACTATGTATGTCAACAACTGCCCCCACAACTCTGTCTCCTGCATTGCCTCCTTCTTGGGTCGCTTCTCCTTCCAGCCCTTCAAGGAAAACCCCCTCTTGGGTCCTTCTTCATTGACGTTACAGAAGATGGGGGCTCTTGATGTGAGCAGAGTGGTTCATAGACACCAGGGGTGGCGCCTTATCTCTTGTATGTGGCTGCATGCTGGGGTTTTCCATCTGTTGGCAAATATGTTGGGTATTCTAGTAATTGGAATTCGGCTAGAGCAAGAATTTGGGTTTGTGCTTATTGGACTGCTGTTTGTCATATCTGGATTTGGGGGCAGTTTGCTTTCTGCTCTTTTCATTCAGTCAAACATTTCTGTGGGTGCTTCTGGTGCACTTTTCGGCTTGCTGGGAGGCATGCTTTCAGAACTGATTACTAACTGGACTATATATGAGAACAAGCTAGCAGCACTCCTCACCCTTGTGATAATCATTGTTATCAATCTAGCAGTGGGAATTCTCCCACATGTGGACAATTTTGCTCATATTGGAGGCTTTCTTACAGGATTTCTTCTCGGATTTGTGTTTCTGATACGTCCCCAGTTCGGATGGGTTAACCAACGATATGCTCCCCTAAATTATTCTCCTGGACGAGCTAAGCCTAAATTCAAAAAATATCAGTGCTTCTTATGGGTCTTCTCTCTCGTCATTCTTGTTGTTGGGCTTGCTGTTGGGCTTGTCGCACTTCTCCGTGGTGTTGATGCAAATGATCACTGTTCCTGGTGCCATTATCTGTCTTGTGTTCCAACTTCAAAATGGAGCTGCCATACAGAACCATCATATTGTGTGTCAAATCAGCTTGGTAACCAGCTGAACGTAACATGCTCAAGCAATGGTAAATCCAGTACATACTTCATGCAAGATCTAACCAGTTCCAAGATCCAACAACTATGTACTCAACTTTGCAGTTGA 1152 0.4609 MPGEPRPLEIHLRVNPKGSNTNMVHPVAVQTLSPVQYPREEVKHYRKWFSWLIPLFVVANIVLFVITMYVNNCPHNSVSCIASFLGRFSFQPFKENPLLGPSSLTLQKMGALDVSRVVHRHQGWRLISCMWLHAGVFHLLANMLGILVIGIRLEQEFGFVLIGLLFVISGFGGSLLSALFIQSNISVGASGALFGLLGGMLSELITNWTIYENKLAALLTLVIIIVINLAVGILPHVDNFAHIGGFLTGFLLGFVFLIRPQFGWVNQRYAPLNYSPGRAKPKFKKYQCFLWVFSLVILVVGLAVGLVALLRGVDANDHCSWCHYLSCVPTSKWSCHTEPSYCVSNQLGNQLNVTCSSNGKSSTYFMQDLTSSKIQQLCTQLCS* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0099 383 PANTHER RHOMBOID-RELATED 17 382 IPR002610 GO:0004252|GO:0006508|GO:0016021
Pvu10g0099 383 Gene3D - 50 259 IPR035952 -
Pvu10g0099 383 PANTHER RHOMBOID-LIKE PROTEIN 4 17 382 - -
Pvu10g0099 383 Pfam Rhomboid family 118 259 IPR022764 GO:0004252|GO:0016021
Pvu10g0099 383 SUPERFAMILY Rhomboid-like 48 261 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0099 Pvu-Chr10 1515567 1524256 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0099 - - gmx:100801675 667.151